PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG75768.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 443aa MW: 49450.2 Da PI: 7.1094

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG75768.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.6	1e-10	237	311	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W ++ aL++a++ m++++ r k ++ +W++v +++++ g+ rs + C +kw+nl +++kk+ + ++ GBG75768.1 237 WLVEHMVALVRAKQnqdghleGMGHTFARMKPREWKWQDVHERLKKVGVARSDENCGKKWDNLMQQFKKVHRFMQ 311 777888899999987777777888999999***************************************987666 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MADLYRRLPV LLLVVILLVV VVLFHMCISL KVPGRTHRRR SAKKGVDMDD WQPKSRALFD 60 SPTAHHAQHS GARKSQQYHP SAYVHIPSHE IPLPPTDDEA EEVIGRRSGG GGVDATFAVD 120 VDERTGRQVW EEHRQQLRGD REDAIMRVVR QLHVGISDAD KEATVEVDNF EDINEEGEND 180 EEAVVDIRPV GRTSMGGRGR SKKASAAHGR GTKKTASSGS DGELQGDMDV NGERNFWLVE 240 HMVALVRAKQ NQDGHLEGMG HTFARMKPRE WKWQDVHERL KKVGVARSDE NCGKKWDNLM 300 QQFKKVHRFM QECGKPDYFQ LTGKERRSHR FNFVMERVVY EEIKGSTAKN HTIHPRNVTD 360 TNAPGGVEMW SGSGRGRGDG GGGGDESGEP HEEEDGSTKG SSFSTCSTAG LAMRQQTFEA 420 LTDVMEKHGT LMATALESAS KRQ

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MADLYRRLPV LLLVVILLVV VVLFHMCISL KVPGRTHRRR SAKKGVDMDD WQPKSRALFD  60
SPTAHHAQHS GARKSQQYHP SAYVHIPSHE IPLPPTDDEA EEVIGRRSGG GGVDATFAVD  120
VDERTGRQVW EEHRQQLRGD REDAIMRVVR QLHVGISDAD KEATVEVDNF EDINEEGEND  180
EEAVVDIRPV GRTSMGGRGR SKKASAAHGR GTKKTASSGS DGELQGDMDV NGERNFWLVE  240
HMVALVRAKQ NQDGHLEGMG HTFARMKPRE WKWQDVHERL KKVGVARSDE NCGKKWDNLM  300
QQFKKVHRFM QECGKPDYFQ LTGKERRSHR FNFVMERVVY EEIKGSTAKN HTIHPRNVTD  360
TNAPGGVEMW SGSGRGRGDG GGGGDESGEP HEEEDGSTKG SSFSTCSTAG LAMRQQTFEA  420
LTDVMEKHGT LMATALESAS KRQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	1e-06	Trihelix family protein