PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76258.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 659aa MW: 71365.9 Da PI: 9.3293

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76258.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.8	2.8e-08	447	510	2	59
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnk 59 W+ +e l+L ++ e++ + +++ + ++We+v+ ++ + g++r+++ C++kw +l k GBG76258.1 447 WSLEERLDLAKFAGEDDALMADAEgaqacmTRLKRWEWVAGRLGDIGYSRTAEDCRKKWAELVK 510 8888888888888888888887655566668899***************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 659 aa Download sequence
MNVVHHLRCR TMPWPSVGRR VHGLAGDFMR RGFVADVQPL WGRGRCVGVP LPKSISFIRR 60 ALSTHVPSLG AVEVGSVARA VRPNIRSVVG RSFLAKANDI THAVERCGGR GRIVEKGLRD 120 RDVAVVGTVY ARPNAAHPPL STSTTAAQDC VVGDGRACPC RCLRDSTGTT VIVIDVGDRD 180 WGGVGSHMFL WGFGRSPRHA SVAVLFSCRS GYLGRRAKAM ERRSFTDDLY SDLGGSCQSA 240 DAGGGTIFCA QPRTESVQSV PSWSYVPQPG VRRGSFDSYG RERSAPQGGN SMAHAPLHSR 300 GFREGPAMAC ANIWGSPPDL PRQLSQPRVG MMPHISLVPV GRTTGGGCSN HPTPHGMSDQ 360 QSAELSAMGG GRVLQGASPA IGEAVVEGAG MGNRGERAEK DDDDGTTSAA SDKIDEGVGD 420 RTKPPPVGGR KRKGGSSPRQ PKKNNPWSLE ERLDLAKFAG EDDALMADAE GAQACMTRLK 480 RWEWVAGRLG DIGYSRTAED CRKKWAELVK KVGSFIPDDW ESLTVDIVGD IVLKLVDNIA 540 EDHDWRLDNG GDIVVERPAA SLADGECRTR VFLHVERGAD CRSRRVWDHA ASGERWHLCR 600 PPIVQRVGLA TCRMGEFADV LNTGEVAEVR LMGMRTFRRP SIVHVFLSPR GAHRRLPLW

Sequence ? help Back to Top

Protein Sequence Length: 659 aa Download sequence

MNVVHHLRCR TMPWPSVGRR VHGLAGDFMR RGFVADVQPL WGRGRCVGVP LPKSISFIRR  60
ALSTHVPSLG AVEVGSVARA VRPNIRSVVG RSFLAKANDI THAVERCGGR GRIVEKGLRD  120
RDVAVVGTVY ARPNAAHPPL STSTTAAQDC VVGDGRACPC RCLRDSTGTT VIVIDVGDRD  180
WGGVGSHMFL WGFGRSPRHA SVAVLFSCRS GYLGRRAKAM ERRSFTDDLY SDLGGSCQSA  240
DAGGGTIFCA QPRTESVQSV PSWSYVPQPG VRRGSFDSYG RERSAPQGGN SMAHAPLHSR  300
GFREGPAMAC ANIWGSPPDL PRQLSQPRVG MMPHISLVPV GRTTGGGCSN HPTPHGMSDQ  360
QSAELSAMGG GRVLQGASPA IGEAVVEGAG MGNRGERAEK DDDDGTTSAA SDKIDEGVGD  420
RTKPPPVGGR KRKGGSSPRQ PKKNNPWSLE ERLDLAKFAG EDDALMADAE GAQACMTRLK  480
RWEWVAGRLG DIGYSRTAED CRKKWAELVK KVGSFIPDDW ESLTVDIVGD IVLKLVDNIA  540
EDHDWRLDNG GDIVVERPAA SLADGECRTR VFLHVERGAD CRSRRVWDHA ASGERWHLCR  600
PPIVQRVGLA TCRMGEFADV LNTGEVAEVR LMGMRTFRRP SIVHVFLSPR GAHRRLPLW