PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76367.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 594aa MW: 64128.3 Da PI: 8.9166

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76367.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	41.2	4.4e-13	312	392	1	76
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsess 76 rW ++e+ L ++r+e++ +++++ k++ W+ v ++mre+g++r +qCk+k++++ y+k+k++e+ s++ GBG76367.1 312 RWGEDETTMLCTVRNEVKGVMGEESevlgrarVKAGFWKLVESRMREKGYNRDHEQCKSKFSQIFDFYRKLKAHERW--SGNP 392 8************88888886533444444****************************************986..3444 PP

Sequence ? help Back to Top
Protein Sequence Length: 594 aa Download sequence
MCSSHNIGVV ANLVHEHGKM HPRCLRKPTG PSPLPIATLL PTALRSENGR REELQVYARG 60 LADGRASANC GQAGVCKGGP SAVVWKCATV SGFSSPVRGF AKVSFRVEQQ DEDSLRERLR 120 LRAMAMDHGQ SSDFRSFPVQ GQCAFSPRIN LPAAVSPLCS ANCVSSGTQN LNAVCSTPPA 180 GLPTPGGRMS HTPQSGVSDG DGGRQAGDRT PGSDYIINRL LREVEAAAGT VEVPAGTGQP 240 GNINVSPVSD THAAPQDIPA HGCGRQSVSP VPDRCGSRSR PSNAESAGRT SVDNRGKGHA 300 PRPPAPDRNS ERWGEDETTM LCTVRNEVKG VMGEESEVLG RARVKAGFWK LVESRMREKG 360 YNRDHEQCKS KFSQIFDFYR KLKAHERWSG NPSYWDMNST TRKRYNVDFV IRRSWYDSIS 420 SSEGDTDSIR LSNLRDSGPE QERMEDGDGD TAGGSEDAGG GARSGAFSPT LGKRKRAVSN 480 APENSMRAVC GAMRDHSSAI TSSDRQCAKL RCDTTLDVAR QQADLQRELL REDIASRERV 540 AAIVGDRMNA GYAIVGDRMN AGYAVLAEAI RSLRSRNRSR DHSHGHAALS SDSK

Sequence ? help Back to Top

Protein Sequence Length: 594 aa Download sequence

MCSSHNIGVV ANLVHEHGKM HPRCLRKPTG PSPLPIATLL PTALRSENGR REELQVYARG  60
LADGRASANC GQAGVCKGGP SAVVWKCATV SGFSSPVRGF AKVSFRVEQQ DEDSLRERLR  120
LRAMAMDHGQ SSDFRSFPVQ GQCAFSPRIN LPAAVSPLCS ANCVSSGTQN LNAVCSTPPA  180
GLPTPGGRMS HTPQSGVSDG DGGRQAGDRT PGSDYIINRL LREVEAAAGT VEVPAGTGQP  240
GNINVSPVSD THAAPQDIPA HGCGRQSVSP VPDRCGSRSR PSNAESAGRT SVDNRGKGHA  300
PRPPAPDRNS ERWGEDETTM LCTVRNEVKG VMGEESEVLG RARVKAGFWK LVESRMREKG  360
YNRDHEQCKS KFSQIFDFYR KLKAHERWSG NPSYWDMNST TRKRYNVDFV IRRSWYDSIS  420
SSEGDTDSIR LSNLRDSGPE QERMEDGDGD TAGGSEDAGG GARSGAFSPT LGKRKRAVSN  480
APENSMRAVC GAMRDHSSAI TSSDRQCAKL RCDTTLDVAR QQADLQRELL REDIASRERV  540
AAIVGDRMNA GYAIVGDRMN AGYAVLAEAI RSLRSRNRSR DHSHGHAALS SDSK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G25990.1	2e-08	Trihelix family protein