PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76385.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 886aa MW: 97829.4 Da PI: 8.0507

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76385.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.3	4e-08	603	676	4	70
trihelix 4 kqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 ++e+++Li+ e++ + +++ lk+ lW +v k +re + rs ++Ck+ w + + y+++k+++k GBG76385.1 603 EEETMKLIRCWYEVKATHDDDSeawgvakLKQRLWPDVEKLVREASYDRSDEECKNWWHFVLNNYRAVKDHDKW 676 78999999998877666665422333333*****************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 886 aa Download sequence
MAGYPPRDNG CYQCGAPNNW IRDYPQCAFW PVATGANAIP TSTPILALLP VNNSSAASSA 60 ANRAPASSNQ HQSSSVAASN HGQNRPNWWT RNQEKPDLCY SKVMEDCEKE AKNREEERLR 120 IEREEEGKRL KWKGELEKFE ADMGLCLEKK LDELGAFIKG KSTSEVPLTN GSEDELTKLR 180 RENGDLKAKI NSFLNKSGDD KVMYLPQEIM ELRKQVTSKQ ASEDAIFALK LEVNEMKRLS 240 NSKLDLEKEV ANLKKEISSL QGRKDRVTAE ANQWKDEALR SGNKRGSVAV CTPDGPARGT 300 PKPRWTDTMR DADKWREEYR NLRNLHQLAN VEAEALKKKR AEAEAKRMEV ELQVKKLEEK 360 MSKLTASGEK GGKGGGTNLK DRMEEVALRS ARKGVKVTPG RLAGRSPSSG ASQEVAEVND 420 HASFVDGEKN KLRLLRKAGL EPLCKEAGIK LGRFEDTICE LAEYRAKIRL GSSFGEGGDA 480 KEACSFVEVD DDSSKEVCEH VTAVTAGGTA QAGARSHDHE LQAPPCRPTT GGDAAVAAEV 540 QALECSPQTM GESGGTSTLA PLARGGGVRS GHEAGRGQTS RGQPARGRAG RGRGKRPHPR 600 FGEEETMKLI RCWYEVKATH DDDSEAWGVA KLKQRLWPDV EKLVREASYD RSDEECKNWW 660 HFVLNNYRAV KDHDKWSGKQ KYFTMNETER KRWVLDFLMR REWYDFIDQH EKDKDAINMN 720 DITDLGAETE NVGVGDGGAD KSAEAGKGGD DGAGSGTSSQ PQDNRTNTAG PSDCARSNAV 780 QGNMAAKRRR GGSNAREVAM GAICGAMRDH TTAQVRSDKE HHAIMREICE KKIAAQERIA 840 KMTCEAMEKD TAARDLRAER MATETRAGYS LLADVIKSLA DRNATQ

Sequence ? help Back to Top

Protein Sequence Length: 886 aa Download sequence

MAGYPPRDNG CYQCGAPNNW IRDYPQCAFW PVATGANAIP TSTPILALLP VNNSSAASSA  60
ANRAPASSNQ HQSSSVAASN HGQNRPNWWT RNQEKPDLCY SKVMEDCEKE AKNREEERLR  120
IEREEEGKRL KWKGELEKFE ADMGLCLEKK LDELGAFIKG KSTSEVPLTN GSEDELTKLR  180
RENGDLKAKI NSFLNKSGDD KVMYLPQEIM ELRKQVTSKQ ASEDAIFALK LEVNEMKRLS  240
NSKLDLEKEV ANLKKEISSL QGRKDRVTAE ANQWKDEALR SGNKRGSVAV CTPDGPARGT  300
PKPRWTDTMR DADKWREEYR NLRNLHQLAN VEAEALKKKR AEAEAKRMEV ELQVKKLEEK  360
MSKLTASGEK GGKGGGTNLK DRMEEVALRS ARKGVKVTPG RLAGRSPSSG ASQEVAEVND  420
HASFVDGEKN KLRLLRKAGL EPLCKEAGIK LGRFEDTICE LAEYRAKIRL GSSFGEGGDA  480
KEACSFVEVD DDSSKEVCEH VTAVTAGGTA QAGARSHDHE LQAPPCRPTT GGDAAVAAEV  540
QALECSPQTM GESGGTSTLA PLARGGGVRS GHEAGRGQTS RGQPARGRAG RGRGKRPHPR  600
FGEEETMKLI RCWYEVKATH DDDSEAWGVA KLKQRLWPDV EKLVREASYD RSDEECKNWW  660
HFVLNNYRAV KDHDKWSGKQ KYFTMNETER KRWVLDFLMR REWYDFIDQH EKDKDAINMN  720
DITDLGAETE NVGVGDGGAD KSAEAGKGGD DGAGSGTSSQ PQDNRTNTAG PSDCARSNAV  780
QGNMAAKRRR GGSNAREVAM GAICGAMRDH TTAQVRSDKE HHAIMREICE KKIAAQERIA  840
KMTCEAMEKD TAARDLRAER MATETRAGYS LLADVIKSLA DRNATQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	337	360	KKKRAEAEAKRMEVELQVKKLEEK