PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG76774.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 794aa MW: 85587.4 Da PI: 6.9123

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG76774.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.4	8.5e-09	192	266	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + ++L++ +r + ++++r k k+ +We+ sk+m+ g + + C +kw+nl ykki++ ++ GBG76774.1 192 WSAEDQMLLVRCKReqdmhlpGLSHNYGRMKTKEWKWEDMSKRMANAGRPKDADDCMKKWDNLFLNYKKIQRFQN 266 8888888999999944444444555666889**************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 794 aa Download sequence
MRFELCSGGG KEASRTFIID GDRSARGIEH GGSLHTEQST LRRAAPVTCA VGPSPAGQQH 60 GLTAPSVDRL GGARSLMPAC TTPVESGVRD EGTCRASVRP RPTVENITRG VSNMWAHNDG 120 GEDDVGFGDD ADEGMREDVE AGDDDDNVPI RPLGKTAGRG KGRGRGGVRG RSVGRGGRGG 180 VSDDAGKSPT YWSAEDQMLL VRCKREQDMH LPGLSHNYGR MKTKEWKWED MSKRMANAGR 240 PKDADDCMKK WDNLFLNYKK IQRFQNASGR PECQRMEGSF CCEGDARWGT RGATTLLVGR 300 ATRFPPCICS ATTLLAGPAA HFPPHICSAL TLIAVIASAL LAVRLLAAEH SCHREGQVSP 360 GTSSFRASVP RRGARGWSQP AEEDNNDDFM TEDDQGEATA SAGRESARQR TPDQSASKRM 420 STPPPEAQQL RVRETWKEKG AVVDLGGEDD ESLERRRLRS ATQATTAAVS TTRTADDERP 480 ITGALPCTPS EPRQRNDGGD GASRQRGGGG GVVADARAAG GEAAGGAGVA VAGVVPPVLV 540 AREEAAVQAT VREEGRGHNT NQRDYNIVHE TKEHYVAIAS GLPPPQLPRS VVVPKSSTRV 600 ARIADQSQLQ QAISRAAAVE NIALRILHGW VFKSGNRPRG YNLAFQYSLE SVATDIARAM 660 WYGEEWRNVV SALICAHTID LNMDLLLWYA GANIEDRPED DDMAAYQEST VISIAHSFRH 720 RRSVVHAANV VMERLGKAKV TLGVYPDYIP DWAPCGIRFA HDATIKGPED AKRLDWLGSG 780 PADDDIKGEG KDDA

Sequence ? help Back to Top

Protein Sequence Length: 794 aa Download sequence

MRFELCSGGG KEASRTFIID GDRSARGIEH GGSLHTEQST LRRAAPVTCA VGPSPAGQQH  60
GLTAPSVDRL GGARSLMPAC TTPVESGVRD EGTCRASVRP RPTVENITRG VSNMWAHNDG  120
GEDDVGFGDD ADEGMREDVE AGDDDDNVPI RPLGKTAGRG KGRGRGGVRG RSVGRGGRGG  180
VSDDAGKSPT YWSAEDQMLL VRCKREQDMH LPGLSHNYGR MKTKEWKWED MSKRMANAGR  240
PKDADDCMKK WDNLFLNYKK IQRFQNASGR PECQRMEGSF CCEGDARWGT RGATTLLVGR  300
ATRFPPCICS ATTLLAGPAA HFPPHICSAL TLIAVIASAL LAVRLLAAEH SCHREGQVSP  360
GTSSFRASVP RRGARGWSQP AEEDNNDDFM TEDDQGEATA SAGRESARQR TPDQSASKRM  420
STPPPEAQQL RVRETWKEKG AVVDLGGEDD ESLERRRLRS ATQATTAAVS TTRTADDERP  480
ITGALPCTPS EPRQRNDGGD GASRQRGGGG GVVADARAAG GEAAGGAGVA VAGVVPPVLV  540
AREEAAVQAT VREEGRGHNT NQRDYNIVHE TKEHYVAIAS GLPPPQLPRS VVVPKSSTRV  600
ARIADQSQLQ QAISRAAAVE NIALRILHGW VFKSGNRPRG YNLAFQYSLE SVATDIARAM  660
WYGEEWRNVV SALICAHTID LNMDLLLWYA GANIEDRPED DDMAAYQEST VISIAHSFRH  720
RRSVVHAANV VMERLGKAKV TLGVYPDYIP DWAPCGIRFA HDATIKGPED AKRLDWLGSG  780
PADDDIKGEG KDDA