PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77064.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 669aa MW: 73704 Da PI: 5.6039

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77064.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.3	1.3e-10	266	342	2	71
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 W +e l+L+ +r + ++++ r k + +W ++s+ mr++g+ r C ++wen+ + ykk+ e+ek+ GBG77064.1 266 WDLNESLVLVXCKRdqedylaNXGSNFXRXKTXEWKWTDISNXMRQQGVMRDWDSCMKRWENVIGHYKKVLEREKES 342 888899999999994444333444445566899***************************************99973 PP

Sequence ? help Back to Top
Protein Sequence Length: 669 aa Download sequence
MGDYRSGAGR EHGMEGAGFT SGTDVREHRF DPVLYSHLPS WQQPLPDDNH WEPPPSTLPL 60 EWGSTQTSYD TVGIPHRRAS SLGPMSALLG EVREGGGHPL DLHLSPSCSM HVSRTLIVDH 120 SSDGRRPMTV ATDVPTKGLS SASVNRQQEV AMKDIGAAAA DSVQRGVXGG TTAAESXPXI 180 ERIXARVSNM RAXGQGEQGG VGNAGCEEEG EVDXDDEDDS DTDEEEEDVV QEVTARGGKK 240 KGSNGRGKGK AKKGGEGGGG NRRGLWDLNE SLVLVXCKRD QEDYLANXGS NFXRXKTXEW 300 KWTDISNXMR QQGVMRDWDS CMKRWENVIG HYKKVLEREK ESGVQSFFTL TAKQRKQLGY 360 KFTMDRMVYD AIDGMQQGNQ AIHPPNLADS GIPQPQQSQQ GEQSHVHGPP ATGETSASEN 420 GEGEGGDGCG TRSSGSAPHG KRKNARQLAF DSVTDVMKTH STVVTNSMDR ASKRQCEVLK 480 RQCDIMEREA MTQERQCDVL DAGQRMLCDA LLKIASAFVF RESMDVVVAL RGRIAGRTVV 540 FYEMRHRRDR DCGRAFDFVQ MVTHHEVRHF EVDENGRACL RLTVGYGFAR GLLTHVVAFA 600 TKVGDAIPDR WDFGVDVLAD LIDLLVSNVA MEFNDRLDEA GAYRVHVDPP LYGREYLHGE 660 IGIVLDGFE

Sequence ? help Back to Top

Protein Sequence Length: 669 aa Download sequence

MGDYRSGAGR EHGMEGAGFT SGTDVREHRF DPVLYSHLPS WQQPLPDDNH WEPPPSTLPL  60
EWGSTQTSYD TVGIPHRRAS SLGPMSALLG EVREGGGHPL DLHLSPSCSM HVSRTLIVDH  120
SSDGRRPMTV ATDVPTKGLS SASVNRQQEV AMKDIGAAAA DSVQRGVXGG TTAAESXPXI  180
ERIXARVSNM RAXGQGEQGG VGNAGCEEEG EVDXDDEDDS DTDEEEEDVV QEVTARGGKK  240
KGSNGRGKGK AKKGGEGGGG NRRGLWDLNE SLVLVXCKRD QEDYLANXGS NFXRXKTXEW  300
KWTDISNXMR QQGVMRDWDS CMKRWENVIG HYKKVLEREK ESGVQSFFTL TAKQRKQLGY  360
KFTMDRMVYD AIDGMQQGNQ AIHPPNLADS GIPQPQQSQQ GEQSHVHGPP ATGETSASEN  420
GEGEGGDGCG TRSSGSAPHG KRKNARQLAF DSVTDVMKTH STVVTNSMDR ASKRQCEVLK  480
RQCDIMEREA MTQERQCDVL DAGQRMLCDA LLKIASAFVF RESMDVVVAL RGRIAGRTVV  540
FYEMRHRRDR DCGRAFDFVQ MVTHHEVRHF EVDENGRACL RLTVGYGFAR GLLTHVVAFA  600
TKVGDAIPDR WDFGVDVLAD LIDLLVSNVA MEFNDRLDEA GAYRVHVDPP LYGREYLHGE  660
IGIVLDGFE

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	248	254	KGKAKKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33550.1	3e-08	Trihelix family protein