PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77068.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

SBP

Protein Properties

Length: 1068aa MW: 111701 Da PI: 8.549

Description

SBP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77068.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SBP	119.3	1.9e-37	444	520	1	77
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S-- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkq 77 +CqvegC+adls+ keyhrrhk+C+ hsk+p+v+ +g+ qrfCqqCsrfh ls fDe+krsC+ rL +hn rrrk++ GBG77068.1 444 MCQVEGCRADLSNSKEYHRRHKICQEHSKTPEVFCKGELQRFCQQCSRFHPLSAFDEGKRSCKMRLIGHNLRRRKAT 520 6*************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 1068 aa Download sequence
MEETTSGRFF GELTKRGPPL TTSPKGLSRG SGKGGGSARG SMGKEGEESQ HGEKNAGGGS 60 CSPPCRQHVP HSSIGRGNTA GVGDGTSGIV GDCTRHEHST AATSASPAHA LPASSTWDSS 120 SWDHADGGGS SNQLPSTTAG TTGTTSMTNR AANSAKYNSH LHHQLLWNDD RTWDWDSVRL 180 LVQLNVNPSP YGMPCGQRKP AIEEQSLCEG RPRNSSIDDG DLGRRQSLSP GGSAMRLGGT 240 SLGPAEGGRN NAGLGQALGA NDVSLSRQYS INDTGQGRGG GQGILGSEVV GSDMGVVAVG 300 GRGDEEVLKE QLQQQRQQKQ QQQQEVMHSS CTAGPSFLNR SSEISSAEVG EAVGKEMVIV 360 MGGSGAAGGT RESFLVDTPP SISGADELAT DRSMVAIMNT ESGGKQRRRA LAGRSGEDTV 420 AGGANLRVGK RSRSGSMGGG TVAMCQVEGC RADLSNSKEY HRRHKICQEH SKTPEVFCKG 480 ELQRFCQQCS RFHPLSAFDE GKRSCKMRLI GHNLRRRKAT DANPCLGSQA SLRAQSPAHN 540 AMAIGRLNSA AENLRAVDGS ASGGGGDGGM MDKGSVGERR TSWHLMKSDP SSRLNVLQDR 600 GGASLTVSSS SPAIIPFSAE SVGHGVEGRV SERRTSWHLM RPDASESIAM TRSQERAGAA 660 VLSSSSDSAT MSTVSGESSS GHHGTGPRMA MPLVGLAGRG WPIRKPSSMP DQGHTPVLRR 720 LLREMAAPMD VDAQGVPVSI ASAMQGAAVQ SGGNRAAEKE VNPIDRPLSM STVSHSTGRV 780 PTCTILSAQQ QNESQTQPTG LTLQELLARK TQMLQAAVPT LQASISRRPT FVPGKMFPIL 840 MMSPGQMAGS SMAGPLEGPQ NKGMEGQSLN EVEGPTMKGA DRVKAGGLKG LSGRGDEGSG 900 NDPHTGRSVD QSQMNAGLLQ GSSEGQRRVL REQGRADGNP GTVRQLQGSI ADNNLGTTGT 960 HLGTIRESQS TAEDNLGTIR EHQGIVESNP GAIRGEQSGN NPGTMREQLQ QKTMRELQGE 1020 CRPIIDLQNS PPQSCHPPPH PPPSPPSGHS QVSSQGPKSR DSVCNTPS

Sequence ? help Back to Top

Protein Sequence Length: 1068 aa Download sequence

MEETTSGRFF GELTKRGPPL TTSPKGLSRG SGKGGGSARG SMGKEGEESQ HGEKNAGGGS  60
CSPPCRQHVP HSSIGRGNTA GVGDGTSGIV GDCTRHEHST AATSASPAHA LPASSTWDSS  120
SWDHADGGGS SNQLPSTTAG TTGTTSMTNR AANSAKYNSH LHHQLLWNDD RTWDWDSVRL  180
LVQLNVNPSP YGMPCGQRKP AIEEQSLCEG RPRNSSIDDG DLGRRQSLSP GGSAMRLGGT  240
SLGPAEGGRN NAGLGQALGA NDVSLSRQYS INDTGQGRGG GQGILGSEVV GSDMGVVAVG  300
GRGDEEVLKE QLQQQRQQKQ QQQQEVMHSS CTAGPSFLNR SSEISSAEVG EAVGKEMVIV  360
MGGSGAAGGT RESFLVDTPP SISGADELAT DRSMVAIMNT ESGGKQRRRA LAGRSGEDTV  420
AGGANLRVGK RSRSGSMGGG TVAMCQVEGC RADLSNSKEY HRRHKICQEH SKTPEVFCKG  480
ELQRFCQQCS RFHPLSAFDE GKRSCKMRLI GHNLRRRKAT DANPCLGSQA SLRAQSPAHN  540
AMAIGRLNSA AENLRAVDGS ASGGGGDGGM MDKGSVGERR TSWHLMKSDP SSRLNVLQDR  600
GGASLTVSSS SPAIIPFSAE SVGHGVEGRV SERRTSWHLM RPDASESIAM TRSQERAGAA  660
VLSSSSDSAT MSTVSGESSS GHHGTGPRMA MPLVGLAGRG WPIRKPSSMP DQGHTPVLRR  720
LLREMAAPMD VDAQGVPVSI ASAMQGAAVQ SGGNRAAEKE VNPIDRPLSM STVSHSTGRV  780
PTCTILSAQQ QNESQTQPTG LTLQELLARK TQMLQAAVPT LQASISRRPT FVPGKMFPIL  840
MMSPGQMAGS SMAGPLEGPQ NKGMEGQSLN EVEGPTMKGA DRVKAGGLKG LSGRGDEGSG  900
NDPHTGRSVD QSQMNAGLLQ GSSEGQRRVL REQGRADGNP GTVRQLQGSI ADNNLGTTGT  960
HLGTIRESQS TAEDNLGTIR EHQGIVESNP GAIRGEQSGN NPGTMREQLQ QKTMRELQGE  1020
CRPIIDLQNS PPQSCHPPPH PPPSPPSGHS QVSSQGPKSR DSVCNTPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G33810.1	9e-32	SBP family protein