PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG77201.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 401aa    MW: 44099.8 Da    PI: 6.1551
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG77201.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.21.8e-12146221270
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +   +Li+a+r+ + +l+       r k ++ +W +v +++++ g+ r++k+C +kw+nl +++kk+ + ++ 
  GBG77201.1 146 WSVDDMITLIRAKRDQDAHLQgmgtafaRMKPREWKWLDVEQRLKKVGVDREAKRCGKKWDNLMQQFKKVHHFQGL 221
                 9999999*******666665533332226789999**********************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 401 aa     Download sequence    
MQSPSPLSAT STAARRRGDC VETDCGIDDV GDACDGREVW EDQRRTLHPR REESITQGVQ  60
RLRVGEHEDD GDAPAVGPND QEWNNDDDEG GEEEAGHVPS FKQSSMGGRG GKTRACGCNG  120
RRGKIVVGKG SDAEVDVDAE GGRQFWSVDD MITLIRAKRD QDAHLQGMGT AFARMKPREW  180
KWLDVEQRLK KVGVDREAKR CGKKWDNLMQ QFKKVHHFQG LSGKQDFFQF SGKERLSKGF  240
NFNMDRAVYD EILGSTAKSH TINPKNVADT GAPGGVRLPS ATSADHECVG DGDAAAGRDD  300
DDDGSARGSS QTTGSPAGFG KRKNTRQQTF EALTECMEKH GALVASTMES NNKRQCSIQI  360
RQCEALEAEV EVQKKHYAAS DEVSKLMCHA LLEIAKVIRE R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.16e-10Trihelix family protein