PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG77414.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 347aa    MW: 38067.5 Da    PI: 7.3465
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG77414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix392e-12158234271
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 
                 W  +e l+L++++r+ ++ + ++       k k  +W+++++ m ++g++    qC ++wen+ + y+k+ ++ek+ 
  GBG77414.1 158 WNLNESLVLVRGKRDQDDYFANAgtnfarmKTKDRKWADIANMMDKEGVRQDGDQCMKRWENIFGWYRKVWDREKES 234
                 999***********77777775423333338*****************************************99973 PP
Sequence ? help Back to Top
Protein Sequence    Length: 347 aa     Download sequence    
MDMSRAVLVN ENGHGGGSTS WTMQDAGFDE GVSQHRPNRV QTVVHHPSSN APNVYGGRPD  60
VSTSAGSHRC VEHIVCRFNN MRANSVGEGA RQGGAASEAE LVDIDIEDDD EEEEVVVKEA  120
TPAGKRKQTS KGRGKGKATA KEGGTNGEGG ESGGRANWNL NESLVLVRGK RDQDDYFANA  180
GTNFARMKTK DRKWADIANM MDKEGVRQDG DQCMKRWENI FGWYRKVWDR EKESGLQSYF  240
LMSSKIRREK GYKFNLDRTL YDAIHIMQGN NQAVHPPNIV DTGNRQAQQS QQGEHSQAAS  300
GGGEADTSAS ENKEADVGDG YGRKSSTNVM QGSRGSGRTP GNWHSRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.17e-12Trihelix family protein