PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77417.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 368aa MW: 39675.1 Da PI: 5.6733

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77417.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.2	1e-08	145	195	19	69
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 e+++++++ ++We +s ++ + gf r+ C+++w+nl k y+k+ +++ GBG77417.1 145 EAIGNACSLNKKWEGISTAVCAAGFIRNGYDCENRWKNLWKWYRKVLVHDG 195 5667788899***********************************866555 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MPQWSTEQLQ EQPLLSPESS VGRVGGVDMS QLGVDVSQLE SQVVCDMPQR SLLSAFDEVV 60 QQTSHSLPTA SLGPSGTVVL RDQELGVGSV DWAGDCGNGL PHQMGGGDDD YADSQSGADS 120 QAGGDRRHHE TEGSVQAHGT PVNSEAIGNA CSLNKKWEGI STAVCAAGFI RNGYDCENRW 180 KNLWKWYRKV LVHDGMSGVQ SYWTMSPEAR ANAELTFRLR RSWFDLIDSF NIRNPVVHPE 240 GVVDPGNEKD GRGPGQGSRG STPVSGGRAE SGVANACAEG AEVGTSAKRR RTLANARERA 300 VKDISAVMRE QTDALREHSR RSVECAELTV KAMYKQAAVQ QQIGKLTAKV AREDMAIRKE 360 IGVAEIAV

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MPQWSTEQLQ EQPLLSPESS VGRVGGVDMS QLGVDVSQLE SQVVCDMPQR SLLSAFDEVV  60
QQTSHSLPTA SLGPSGTVVL RDQELGVGSV DWAGDCGNGL PHQMGGGDDD YADSQSGADS  120
QAGGDRRHHE TEGSVQAHGT PVNSEAIGNA CSLNKKWEGI STAVCAAGFI RNGYDCENRW  180
KNLWKWYRKV LVHDGMSGVQ SYWTMSPEAR ANAELTFRLR RSWFDLIDSF NIRNPVVHPE  240
GVVDPGNEKD GRGPGQGSRG STPVSGGRAE SGVANACAEG AEVGTSAKRR RTLANARERA  300
VKDISAVMRE QTDALREHSR RSVECAELTV KAMYKQAAVQ QQIGKLTAKV AREDMAIRKE  360
IGVAEIAV