PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77535.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1134aa MW: 126030 Da PI: 8.1914

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77535.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.3	9.4e-09	47	124	2	71
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 Wt ++ aL++a+r ++++++r k++ +W+++ k++ + g+ +r+ k+C kw+nl +++k + +++++ GBG77535.1 47 WTVDHMIALVRAKRdqdlhlaGLGHNYGRIKSRTWKWDDIEKRLVKAGVtTRKVKKCGRKWDNLYQQFKSVHRSMGQS 124 9***********55555555566666789*********88887699*****************9998874 PP

Sequence ? help Back to Top
Protein Sequence Length: 1134 aa Download sequence
MEICPLWRKG GGTGATNKST EPRAGRKGKK AVDDTSTGDG GKSRNFWTVD HMIALVRAKR 60 DQDLHLAGLG HNYGRIKSRT WKWDDIEKRL VKAGVTTRKV KKCGRKWDNL YQQFKSVHRS 120 MGQSGKQNFF TLTPAEKKEK GFNFRMDERV YSEMNEMSKA DHNIHPVNLA DMGAAGGVQM 180 VRPSGDQNES AAGEGFGDGQ DDDQGSTRDS TFSGGSAGGG AKGRMSDNRP SMRSPTSWVS 240 TEADGDNGGQ RVDPHQNIDP NPARSGPVAR SSNLNVNKMV LKESEQRSSF PRRHVSDSPF 300 ALRACNSVDR NGKLSAVVAT VGDALSLSLS IPAVDQPASL AGDVVRPFVP FCGRCCSSGQ 360 AEARDTCMRA DSRVSTDPCG SQGLCRQLLC DGRKLDGENV SVRSSQGVTT SIASLPTDIL 420 LECLALIPRR DHRHLRAVCR LWRSLVDSCQ LYEQRKRMGI TEKWLYVLDK FFDFSVDRND 480 CLEGEFYDPK FDTWRSFEPL PDCHGRPAGS REGFGCAVIG REIFLFGGHV AVPSMSSRRL 540 ERTESRREGN TAKEEKEELE GKGFEFADCV DDLWTAEAEA VRFLRNVAAA ERRGARKSYS 600 PARIVSPSWG ASGKRLHGGG IAAEGRDRGT RTKCGKERWT RYTTPELLKL DLQNPCCRYE 660 KRVMQPMIEP RADFAWGVVD RKVIVAGGRR IEGVRHFLRE SSAIPEDDVW EDAEEEEEEK 720 EEEKEEGKED EVGVVVDRSL SLRRSGRSSP DARTEPAEQL RGGGGGDGGG GGGKSQHKAG 780 RGMVALDSVE IYDPVMNTWQ SLPRMQRPRY GCRGEVMEGS FIVIGGYEPI GVVVDDDEDN 840 DHHRHFSSAG VEGRRRGGST CWVASESVMA YDFSTQRWEL RTYLPSFPRF ETECYRNFGC 900 TVMNDRLVVV SGSHRVVAPR ARSLLKFNNA IMAHDGLRSP FWKVLDRLPP HQTRGGGECR 960 QHRQHHREHR EYDWEMEKEK RMGVRFWQGD RYHQGTDWCT KVSAQPGTRQ GCVCAVLEEK 1020 LYVVGGRNVV VDDLNELPDG GGKCVRGCSN KRIDSQKRPG SDNILFRTDL LDTVVEYSAS 1080 ATADDGGMAG GEEGRREFVG CFPRGNTGKG SLPLRLVKPM RRGRADCICF VMEG

Sequence ? help Back to Top

Protein Sequence Length: 1134 aa Download sequence

MEICPLWRKG GGTGATNKST EPRAGRKGKK AVDDTSTGDG GKSRNFWTVD HMIALVRAKR  60
DQDLHLAGLG HNYGRIKSRT WKWDDIEKRL VKAGVTTRKV KKCGRKWDNL YQQFKSVHRS  120
MGQSGKQNFF TLTPAEKKEK GFNFRMDERV YSEMNEMSKA DHNIHPVNLA DMGAAGGVQM  180
VRPSGDQNES AAGEGFGDGQ DDDQGSTRDS TFSGGSAGGG AKGRMSDNRP SMRSPTSWVS  240
TEADGDNGGQ RVDPHQNIDP NPARSGPVAR SSNLNVNKMV LKESEQRSSF PRRHVSDSPF  300
ALRACNSVDR NGKLSAVVAT VGDALSLSLS IPAVDQPASL AGDVVRPFVP FCGRCCSSGQ  360
AEARDTCMRA DSRVSTDPCG SQGLCRQLLC DGRKLDGENV SVRSSQGVTT SIASLPTDIL  420
LECLALIPRR DHRHLRAVCR LWRSLVDSCQ LYEQRKRMGI TEKWLYVLDK FFDFSVDRND  480
CLEGEFYDPK FDTWRSFEPL PDCHGRPAGS REGFGCAVIG REIFLFGGHV AVPSMSSRRL  540
ERTESRREGN TAKEEKEELE GKGFEFADCV DDLWTAEAEA VRFLRNVAAA ERRGARKSYS  600
PARIVSPSWG ASGKRLHGGG IAAEGRDRGT RTKCGKERWT RYTTPELLKL DLQNPCCRYE  660
KRVMQPMIEP RADFAWGVVD RKVIVAGGRR IEGVRHFLRE SSAIPEDDVW EDAEEEEEEK  720
EEEKEEGKED EVGVVVDRSL SLRRSGRSSP DARTEPAEQL RGGGGGDGGG GGGKSQHKAG  780
RGMVALDSVE IYDPVMNTWQ SLPRMQRPRY GCRGEVMEGS FIVIGGYEPI GVVVDDDEDN  840
DHHRHFSSAG VEGRRRGGST CWVASESVMA YDFSTQRWEL RTYLPSFPRF ETECYRNFGC  900
TVMNDRLVVV SGSHRVVAPR ARSLLKFNNA IMAHDGLRSP FWKVLDRLPP HQTRGGGECR  960
QHRQHHREHR EYDWEMEKEK RMGVRFWQGD RYHQGTDWCT KVSAQPGTRQ GCVCAVLEEK  1020
LYVVGGRNVV VDDLNELPDG GGKCVRGCSN KRIDSQKRPG SDNILFRTDL LDTVVEYSAS  1080
ATADDGGMAG GEEGRREFVG CFPRGNTGKG SLPLRLVKPM RRGRADCICF VMEG

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	98	140	RKVKKCGRKWDNLYQQFKSVHRSMGQSGKQNFFTLTPAEKKEK
2	761	774	RGGGGGDGGGGGGK