PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77658.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 588aa MW: 64017 Da PI: 9.659

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77658.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.8	3.2e-09	18	66	17	65
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkik 65 m+++ k ++ +W++v +++++ g+er+ +C +kw+nl +++kk+ GBG77658.1 18 MGHACAHMKTREWKWADVEERLKKVGVERTTDKCGKKWDNLMQQFKKVH 66 3333445579999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 588 aa Download sequence
MNAIIRAKWD EEAHMQGMGH ACAHMKTREW KWADVEERLK KVGVERTTDK CGKKWDNLMQ 60 QFKKVHLFQG ESGKQDFFQL TGKERSTHGF NFTMDRAVYE EIKGSTAKNH TINPKHVANT 120 GGSGGVQLSS GFAGSPQSVG DGDTGGDDND EEDNSTKGSS PTMGSSAGFG KRKNVRQQTF 180 EALTECREKH RTLMATTMGS AGKRQCSIQL RQCEAMEAEV EVQRKHYAAL DSVTKLMCQA 240 LLEIAKAIRH PIAHFTPSSL SVIVLVVFTM SSHGGNRGKK RDSLEAEAPA AVKKGRHQPK 300 NKKVVAEGLS RGSATRDDEW VRDFKGAGGG GRKADVVIDV DAGQAAREVL LDAAPQTAPA 360 GGAVARTRVT APPDAQDSAW VQSPPTTPRG QAIPEKGGAA KVVVQGSGHD THRQDPIASQ 420 GGVVAGSSRL TAVAATAESR GRRGEGDADE PLVNRQRWGN ARDGIEAATK LWVDDMRFWN 480 ETEGNGLFKV IQEARLYLLA IAKGVATHEI HRSIALPHSS IPQHKIEDES QPKAVKDRAT 540 KVQSIVLRVI HGWIFKSASR SWGYHSTYGY VLNHVVTDMA RVMWLGED

Sequence ? help Back to Top

Protein Sequence Length: 588 aa Download sequence

MNAIIRAKWD EEAHMQGMGH ACAHMKTREW KWADVEERLK KVGVERTTDK CGKKWDNLMQ  60
QFKKVHLFQG ESGKQDFFQL TGKERSTHGF NFTMDRAVYE EIKGSTAKNH TINPKHVANT  120
GGSGGVQLSS GFAGSPQSVG DGDTGGDDND EEDNSTKGSS PTMGSSAGFG KRKNVRQQTF  180
EALTECREKH RTLMATTMGS AGKRQCSIQL RQCEAMEAEV EVQRKHYAAL DSVTKLMCQA  240
LLEIAKAIRH PIAHFTPSSL SVIVLVVFTM SSHGGNRGKK RDSLEAEAPA AVKKGRHQPK  300
NKKVVAEGLS RGSATRDDEW VRDFKGAGGG GRKADVVIDV DAGQAAREVL LDAAPQTAPA  360
GGAVARTRVT APPDAQDSAW VQSPPTTPRG QAIPEKGGAA KVVVQGSGHD THRQDPIASQ  420
GGVVAGSSRL TAVAATAESR GRRGEGDADE PLVNRQRWGN ARDGIEAATK LWVDDMRFWN  480
ETEGNGLFKV IQEARLYLLA IAKGVATHEI HRSIALPHSS IPQHKIEDES QPKAVKDRAT  540
KVQSIVLRVI HGWIFKSASR SWGYHSTYGY VLNHVVTDMA RVMWLGED