PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77681.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

MYB_related

Protein Properties

Length: 1213aa MW: 129502 Da PI: 5.5766

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	26.6	1.4e-08	1010	1058	3	48
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHHT CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqkyl 48 +WT E l+++v++ Ggg W+ I + +Rt+ ++k++w+++l GBG77681.1 1010 PWTLKEVMTLIEGVARCGGGKWADIKKLAFssvGHRTAVDLKDKWRNLL 1058 8************************9888888***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 1213 aa Download sequence
MFLSSVFKMV MMAGHSDPLG RPFPMAQLPQ CYGGPVVAGG QPPVPEGNSN KLVYKLVKVN 60 EDGTMCPATE EEVFQLEAMV GMLDETSSSS DVPEDGDVDS DNSDDDDEDD DDDDDEDEDE 120 DEDEEDEEEE EDEDDDDDDD GDDDDDDDDD EEEEEEEEEE EEEEEEEEGE ADNGQRDDGS 180 MDTMKEDYEA DGRTQFSGVC GFSQMKTSRN DMLQQAFERL RGIGQSNDGR RNLLARMEVL 240 NSYLLKVEEQ GRVQGSAPPA DVRCMTVGLQ GSGDAVSESK RRRRPNPKYF SCGDKGDFVA 300 IQSPALNNHH RASQREHASF HPAARGRSKR RSASHKRLPG KKRKTSVMLA NRDPLGRFLR 360 KDEAPKNTQP VDARTQLMQA HVKLEEQPAE GLFSSAPVAS SITSVTCVPA AKSMLMYAAS 420 DASALSRGLA LSVTDKDQGC GKATKRNCSS PSSSTQKGYQ STVRQGDLSP SIGGYAPVVD 480 EDPTVVLRER VRTQPAAEPR LQGEWTSNFV RVVADQGRVV AGLMTVAQRN CVERGVQCDE 540 DIEHASMRNS IYMEGRNIET SCNSQNALSP LCLSGITGQP IFTGSGSMDA AEDVHGRKEG 600 LATPVTTLCT LPISSSGNQN CPKNATSTVP SRKKKLTVIL PSAPVDCQSA RIPPAAVDVK 660 PSGQDFDTAP WSQGNKLPVS PRSAMPLAAK GGGGATYFSG ISSSQPLIVG IAACTGSNDA 720 HRRGGIAVPV GCLEACEPGA GHLGVGGIKE TDSSSPARSE VPEQGIVRYG QSGGAAVESL 780 VCNEGTLAAE PGNQGGGSGM SGGNPNKRQR KPNPRYFNEH QAAEINPTSS TNAVLLSLPP 840 SVPVGNGKSG LVGHQPLLEA HQVGGRVVNA ASGSKGAGVG GRQSGRPALE FASAGGSGGS 900 IPTTRGKRKQ ISPKDCRVLK MAKFGSGIGH HDKLSLISHV KVNAPTAPME REGGDGSHVQ 960 QPLSAECYSH DLNVIRDLAS IECKPESGND PSPAVVPATS GVPRRKHHRP WTLKEVMTLI 1020 EGVARCGGGK WADIKKLAFS SVGHRTAVDL KDKWRNLLRA SRLPPQSGHC PQVEHSSRQQ 1080 LSEALGNAAE ATQLQGTTRQ AYKQHGNSAA KHKATPAQRP HHVACKQGTR KGRHTDGQQG 1140 SSAAKHRATP TLQPHYTVNT VACKGRHATP TGWAARQRRS ADKAVYTSNM EQSSTSPTHI 1200 TGEPCRLLVP ITC

Sequence ? help Back to Top

Protein Sequence Length: 1213 aa Download sequence

MFLSSVFKMV MMAGHSDPLG RPFPMAQLPQ CYGGPVVAGG QPPVPEGNSN KLVYKLVKVN  60
EDGTMCPATE EEVFQLEAMV GMLDETSSSS DVPEDGDVDS DNSDDDDEDD DDDDDEDEDE  120
DEDEEDEEEE EDEDDDDDDD GDDDDDDDDD EEEEEEEEEE EEEEEEEEGE ADNGQRDDGS  180
MDTMKEDYEA DGRTQFSGVC GFSQMKTSRN DMLQQAFERL RGIGQSNDGR RNLLARMEVL  240
NSYLLKVEEQ GRVQGSAPPA DVRCMTVGLQ GSGDAVSESK RRRRPNPKYF SCGDKGDFVA  300
IQSPALNNHH RASQREHASF HPAARGRSKR RSASHKRLPG KKRKTSVMLA NRDPLGRFLR  360
KDEAPKNTQP VDARTQLMQA HVKLEEQPAE GLFSSAPVAS SITSVTCVPA AKSMLMYAAS  420
DASALSRGLA LSVTDKDQGC GKATKRNCSS PSSSTQKGYQ STVRQGDLSP SIGGYAPVVD  480
EDPTVVLRER VRTQPAAEPR LQGEWTSNFV RVVADQGRVV AGLMTVAQRN CVERGVQCDE  540
DIEHASMRNS IYMEGRNIET SCNSQNALSP LCLSGITGQP IFTGSGSMDA AEDVHGRKEG  600
LATPVTTLCT LPISSSGNQN CPKNATSTVP SRKKKLTVIL PSAPVDCQSA RIPPAAVDVK  660
PSGQDFDTAP WSQGNKLPVS PRSAMPLAAK GGGGATYFSG ISSSQPLIVG IAACTGSNDA  720
HRRGGIAVPV GCLEACEPGA GHLGVGGIKE TDSSSPARSE VPEQGIVRYG QSGGAAVESL  780
VCNEGTLAAE PGNQGGGSGM SGGNPNKRQR KPNPRYFNEH QAAEINPTSS TNAVLLSLPP  840
SVPVGNGKSG LVGHQPLLEA HQVGGRVVNA ASGSKGAGVG GRQSGRPALE FASAGGSGGS  900
IPTTRGKRKQ ISPKDCRVLK MAKFGSGIGH HDKLSLISHV KVNAPTAPME REGGDGSHVQ  960
QPLSAECYSH DLNVIRDLAS IECKPESGND PSPAVVPATS GVPRRKHHRP WTLKEVMTLI  1020
EGVARCGGGK WADIKKLAFS SVGHRTAVDL KDKWRNLLRA SRLPPQSGHC PQVEHSSRQQ  1080
LSEALGNAAE ATQLQGTTRQ AYKQHGNSAA KHKATPAQRP HHVACKQGTR KGRHTDGQQG  1140
SSAAKHRATP TLQPHYTVNT VACKGRHATP TGWAARQRRS ADKAVYTSNM EQSSTSPTHI  1200
TGEPCRLLVP ITC

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	329	344	KRRSASHKRLPGKKRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G72650.2	1e-21	MYB_related family protein