PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77712.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 619aa MW: 67145 Da PI: 8.1207

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77712.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	34	7.4e-11	364	438	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aL++a+r m +++ r k ++ +We+v ++++ g++r+ + C +kw+nl +++kk+ + ++ GBG77712.1 364 WSVGDTFALVRAKRdqdlyiaGMSTSFARMKTREWKWEDVRARLQTMGVTRETVDCGKKWDNLMQQFKKVHKFQN 438 88889999999999999998899999*******************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 619 aa Download sequence
MGDLLHRLPL LLLVVVLLLV VVFFHVCFVG LVPLAARRRR SSKKADRMDR RVANGRRAGT 60 TSGPSNRQRS AGSVSKQPYD PRLYAHLPSH EIPLPPSDDE GEDVRLSTLP LGSGSTQKWA 120 ATQSHGGKRV ETPWSYKSLL NEGLCDNDNN AAVDLSFQLS NSSGAAATHT RIINPHPGGH 180 FADNTYGGVS GARDGGLPQS LREGGGNRNE SSTSVGGGVG ADERPEWICL SPASLSGSGT 240 PRGRQRPEDL RDRGARVQRD GRQLWAECRQ ALHQGGTETI TRGVQQLHVD EGIEAVVDEA 300 RGCDEVDGDD ICNSDDLPDI RSLGRKAASG GATPKKGPAT KNRRNRKMDD DTGRSDGEGG 360 RNFWSVGDTF ALVRAKRDQD LYIAGMSTSF ARMKTREWKW EDVRARLQTM GVTRETVDCG 420 KKWDNLMQQF KKVHKFQNLS VGKDYFKLAS KASQSEGFSF VMDRSVYDEM EAMTKGDHTI 480 HPKNLADTGA AGGVQMPAGA VAGGETMAGE GGGEAADEEQ GSTKDSTFSA GSSGGYGKRK 540 NMQQQTFEAV ADVMDKHGAL IASTMDSASK RQCSMMLRQC EILENEVEVQ RKHYAAADEA 600 NKMMCTALME IAKAIRQRS

Sequence ? help Back to Top

Protein Sequence Length: 619 aa Download sequence

MGDLLHRLPL LLLVVVLLLV VVFFHVCFVG LVPLAARRRR SSKKADRMDR RVANGRRAGT  60
TSGPSNRQRS AGSVSKQPYD PRLYAHLPSH EIPLPPSDDE GEDVRLSTLP LGSGSTQKWA  120
ATQSHGGKRV ETPWSYKSLL NEGLCDNDNN AAVDLSFQLS NSSGAAATHT RIINPHPGGH  180
FADNTYGGVS GARDGGLPQS LREGGGNRNE SSTSVGGGVG ADERPEWICL SPASLSGSGT  240
PRGRQRPEDL RDRGARVQRD GRQLWAECRQ ALHQGGTETI TRGVQQLHVD EGIEAVVDEA  300
RGCDEVDGDD ICNSDDLPDI RSLGRKAASG GATPKKGPAT KNRRNRKMDD DTGRSDGEGG  360
RNFWSVGDTF ALVRAKRDQD LYIAGMSTSF ARMKTREWKW EDVRARLQTM GVTRETVDCG  420
KKWDNLMQQF KKVHKFQNLS VGKDYFKLAS KASQSEGFSF VMDRSVYDEM EAMTKGDHTI  480
HPKNLADTGA AGGVQMPAGA VAGGETMAGE GGGEAADEEQ GSTKDSTFSA GSSGGYGKRK  540
NMQQQTFEAV ADVMDKHGAL IASTMDSASK RQCSMMLRQC EILENEVEVQ RKHYAAADEA  600
NKMMCTALME IAKAIRQRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	2e-07	Trihelix family protein