PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG77738.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 512aa MW: 55251.7 Da PI: 8.2335

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG77738.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	31.8	3.6e-10	255	329	2	69
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ +e +L++ +re e +l r + k+ +We+++k+m+ g ++ C +kw+n+ + ykki++ ++ GBG77738.1 255 WSPKEQIQLVRCKREQEMHLAglghnygRMRTKEWKWEDIAKRMANAGRPTDANNCMKKWDNIFQNYKKIQRFQN 329 9999999999999966665553333332778**************************************987655 PP

Sequence ? help Back to Top
Protein Sequence Length: 512 aa Download sequence
MFPLASGSTQ LLSQTVLAGR SASNGRGEYT TLLQQGLGDD DDGGVDLRFG LSSGGGREAS 60 RTFIIDAHPS PRGVQQSGSR HTEQSTLPDC TSVCVGVRPS SAGQQHGSSA LSADRLTNTF 120 PERNGVAVGS LRIGGTLHSM PKSTMPTQPD LREDGTCRPA VRQTPSVENI TRGVSNMRAQ 180 SDGGDDDGGG GDDADGRFGE DVEAGDDDND IPIRSLGKTG GRGRGRSRGA VRGRSVGRGG 240 RGGVNDDGGR SATYWSPKEQ IQLVRCKREQ EMHLAGLGHN YGRMRTKEWK WEDIAKRMAN 300 AGRPTDANNC MKKWDNIFQN YKKIQRFQNA SGRPDFFRLS NEERKEHNFK FRMERALYNE 360 IHIGMVGNHT IFPPNIADTG SPDWVHLPRR GAGAGESVGS EGAGEGLPEE RSTTRDSDSN 420 AASGAGGGKR KNARQQALES IADVMDRHGX LMSSTIESSS KRQCSIFTRQ CDILEQEVAV 480 QKAHYAASDE TQRMMCHALL EIAAAIRGRS AT

Sequence ? help Back to Top

Protein Sequence Length: 512 aa Download sequence

MFPLASGSTQ LLSQTVLAGR SASNGRGEYT TLLQQGLGDD DDGGVDLRFG LSSGGGREAS  60
RTFIIDAHPS PRGVQQSGSR HTEQSTLPDC TSVCVGVRPS SAGQQHGSSA LSADRLTNTF  120
PERNGVAVGS LRIGGTLHSM PKSTMPTQPD LREDGTCRPA VRQTPSVENI TRGVSNMRAQ  180
SDGGDDDGGG GDDADGRFGE DVEAGDDDND IPIRSLGKTG GRGRGRSRGA VRGRSVGRGG  240
RGGVNDDGGR SATYWSPKEQ IQLVRCKREQ EMHLAGLGHN YGRMRTKEWK WEDIAKRMAN  300
AGRPTDANNC MKKWDNIFQN YKKIQRFQNA SGRPDFFRLS NEERKEHNFK FRMERALYNE  360
IHIGMVGNHT IFPPNIADTG SPDWVHLPRR GAGAGESVGS EGAGEGLPEE RSTTRDSDSN  420
AASGAGGGKR KNARQQALES IADVMDRHGX LMSSTIESSS KRQCSIFTRQ CDILEQEVAV  480
QKAHYAASDE TQRMMCHALL EIAAAIRGRS AT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-06	Trihelix family protein