PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG78541.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 927aa MW: 101502 Da PI: 8.1387

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG78541.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.2	2.4e-09	100	174	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + ++L++ +r +++++rr + k+ +W++++k+m+ g + + C +kw nl + ykk+++ ++ GBG78541.1 100 WSTDDQMLLVRCKReqemhlaGLGHNYRRMRTKEWKWDDIAKRMANAGRPKDADDCMKKWGNLFQNYKKMQRFQN 174 8888888888988844444444556666889**************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 927 aa Download sequence
MDEGACRAPV RPRPTVENIT RGVSNMQAHN DGGDDDGSGG DDADEGFRED VEAGDDDDDI 60 PIRPSGRGKG RSRGVVRGRS VGRGGRGGVG DDGGKSATYW STDDQMLLVR CKREQEMHLA 120 GLGHNYRRMR TKEWKWDDIA KRMANAGRPK DADDCMKKWG NLFQNYKKMQ RFQNASGQAD 180 FFRLSNEERK EHNFKFRMER VLYNDIHAGM LGNHTIFPPN VADIASPDGV QLPRRGAAGG 240 ESVGSEAEGF LEERSAARDS DNDAGSGAGG GKRKNARQQA LESIADVMDR HGELMSSTIN 300 SSSKRQCNIF TRQYDILEEE VAVQKAHYAA FDETQRETYL ATTFVAALSW RSPRHSLTTS 360 RTSPSADTSL PSPWSIVFGS GTILSKVVVR EFFLHCWSSA GRLHNVRLHS VAMAPREGSV 420 ARGRGKKRDA LDGEVVVGSG GGRPVAKAKR SPQDTTLTSG KQVKGDWWGR PGAGDVNDVS 480 TNPTPEVSLP VMPTSVHGPA LTSESSVART REERIINIDV DEAARVDHGE GGATIAPVKT 540 PQGAMAATPR QQYAGGRQAG AAGDAGAAGD SVQAQVAGAN VEHVAITPRA TGGEECRRKE 600 AARAVDRARV EKKKATDDDE PLVNRVSNVT MTRLTDAAQL QGALSQASKC QNMAMRVLHG 660 WVFKSGCKER GDTLAFQYVL ESVATDFARA MWHGEEWSNV ESPAICSHTL ELGMELWYAG 720 AQIEDRPKDD DMAVYQEATV TRLIAAFSAA VEMGQSIDGG SITPERLSRV VESFKVILAA 780 SMWIMRMLGD DHRSHYEAFT SATSSRNPTV GPHYGARHGT ATTAMMKANL VRGGTKRMIP 840 PALSTMMMTT KTTHRMMMMM VTMMMMMMMT MMMLMMMTTT MMMVTMMMMM TMMMVMTTTT 900 LMVMMMMMTM MILSIVYFVR VRQCSPV

Sequence ? help Back to Top

Protein Sequence Length: 927 aa Download sequence

MDEGACRAPV RPRPTVENIT RGVSNMQAHN DGGDDDGSGG DDADEGFRED VEAGDDDDDI  60
PIRPSGRGKG RSRGVVRGRS VGRGGRGGVG DDGGKSATYW STDDQMLLVR CKREQEMHLA  120
GLGHNYRRMR TKEWKWDDIA KRMANAGRPK DADDCMKKWG NLFQNYKKMQ RFQNASGQAD  180
FFRLSNEERK EHNFKFRMER VLYNDIHAGM LGNHTIFPPN VADIASPDGV QLPRRGAAGG  240
ESVGSEAEGF LEERSAARDS DNDAGSGAGG GKRKNARQQA LESIADVMDR HGELMSSTIN  300
SSSKRQCNIF TRQYDILEEE VAVQKAHYAA FDETQRETYL ATTFVAALSW RSPRHSLTTS  360
RTSPSADTSL PSPWSIVFGS GTILSKVVVR EFFLHCWSSA GRLHNVRLHS VAMAPREGSV  420
ARGRGKKRDA LDGEVVVGSG GGRPVAKAKR SPQDTTLTSG KQVKGDWWGR PGAGDVNDVS  480
TNPTPEVSLP VMPTSVHGPA LTSESSVART REERIINIDV DEAARVDHGE GGATIAPVKT  540
PQGAMAATPR QQYAGGRQAG AAGDAGAAGD SVQAQVAGAN VEHVAITPRA TGGEECRRKE  600
AARAVDRARV EKKKATDDDE PLVNRVSNVT MTRLTDAAQL QGALSQASKC QNMAMRVLHG  660
WVFKSGCKER GDTLAFQYVL ESVATDFARA MWHGEEWSNV ESPAICSHTL ELGMELWYAG  720
AQIEDRPKDD DMAVYQEATV TRLIAAFSAA VEMGQSIDGG SITPERLSRV VESFKVILAA  780
SMWIMRMLGD DHRSHYEAFT SATSSRNPTV GPHYGARHGT ATTAMMKANL VRGGTKRMIP  840
PALSTMMMTT KTTHRMMMMM VTMMMMMMMT MMMLMMMTTT MMMVTMMMMM TMMMVMTTTT  900
LMVMMMMMTM MILSIVYFVR VRQCSPV