PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG78764.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 751aa MW: 81099.3 Da PI: 10.1586

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG78764.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.5	2.2e-10	255	326	2	66
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 W+ +e ++L++ +re e +l r + k+ +W++++k+m+ g + ++ C +kwen+ + ykk++ GBG78764.1 255 WSPEEQMQLVRCKREQEMHLAglghnygRMRTKEWKWDDIAKRMANAGRPKDAEDCMKKWENIFQNYKKVQS 326 9***********66666553333333778************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 751 aa Download sequence
MFPLSSRSTQ LLSQTVLAGG SASNGRGEYT TLLQQGLGDD DDGGVDLRFR LCSGGGGEPS 60 RTFIIGADPS PRGVQQSGSR HTEQSTLRGG ASVTGGVRPS ASGRQHGSSA PTADRLTSTC 120 PARHGAVVGS LRIGGTLHST FKTTTPAQPD LKDDGTCRPA VRPAPSVENI TRGVSNMRAH 180 NNGGDDDGGG GDDVDERSGE DMKAGDDDDD IPIRLLGKTG GRGRGRSRGA VHRRSVGRGG 240 RGGVSDDGGK SATYWSPEEQ MQLVRCKREQ EMHLAGLGHN YGRMRTKEWK WDDIAKRMAN 300 AGRPKDAEDC MKKWENIFQN YKKVQSGGQI SCVAGVSIVV MSSSRGGQIF CLPRARRCLL 360 PADYRSPASR GCPSSSRLLP TEGRSSLYHA QVVVVTPQPH GRHFSRETYF QEIYFLPRRP 420 HFPLIRSHRQ ARLQRSPRNM STRGNTRGKK RDVVVDDSQG HGRGRRQAPK VKRLHTEDVS 480 VGVPRRGAQG WAAAAEGDYD DEFTTEEEQA EATTSEVRKS GRQRSSDHTA SKRMMTPPPE 540 AQQLRGSETR TEKALVVDLG GDDDEPLERR RIRIHTAATP PSEVAVLVAA KERPVSGRLP 600 ATPCQPHQHN EGGNGGFVQR GSGGEVVADA RAVGAEEGGA AGAGGSCTVA AVAMAREEVA 660 VGATTREEAR GKKKGDREAG ERGSSRVHRS SMTKDLIDRA VFWVDDKAFW TMGEGRRLYN 720 IVRDTREYFV TIASCLLTPV VPRSVRNPAR V

Sequence ? help Back to Top

Protein Sequence Length: 751 aa Download sequence

MFPLSSRSTQ LLSQTVLAGG SASNGRGEYT TLLQQGLGDD DDGGVDLRFR LCSGGGGEPS  60
RTFIIGADPS PRGVQQSGSR HTEQSTLRGG ASVTGGVRPS ASGRQHGSSA PTADRLTSTC  120
PARHGAVVGS LRIGGTLHST FKTTTPAQPD LKDDGTCRPA VRPAPSVENI TRGVSNMRAH  180
NNGGDDDGGG GDDVDERSGE DMKAGDDDDD IPIRLLGKTG GRGRGRSRGA VHRRSVGRGG  240
RGGVSDDGGK SATYWSPEEQ MQLVRCKREQ EMHLAGLGHN YGRMRTKEWK WDDIAKRMAN  300
AGRPKDAEDC MKKWENIFQN YKKVQSGGQI SCVAGVSIVV MSSSRGGQIF CLPRARRCLL  360
PADYRSPASR GCPSSSRLLP TEGRSSLYHA QVVVVTPQPH GRHFSRETYF QEIYFLPRRP  420
HFPLIRSHRQ ARLQRSPRNM STRGNTRGKK RDVVVDDSQG HGRGRRQAPK VKRLHTEDVS  480
VGVPRRGAQG WAAAAEGDYD DEFTTEEEQA EATTSEVRKS GRQRSSDHTA SKRMMTPPPE  540
AQQLRGSETR TEKALVVDLG GDDDEPLERR RIRIHTAATP PSEVAVLVAA KERPVSGRLP  600
ATPCQPHQHN EGGNGGFVQR GSGGEVVADA RAVGAEEGGA AGAGGSCTVA AVAMAREEVA  660
VGATTREEAR GKKKGDREAG ERGSSRVHRS SMTKDLIDRA VFWVDDKAFW TMGEGRRLYN  720
IVRDTREYFV TIASCLLTPV VPRSVRNPAR V