PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79337.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 444aa    MW: 47300.3 Da    PI: 7.869
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79337.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix301.4e-09202274268
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 Wt +e  +L ++  e++  +++++       k+ + ++++++m+++g+ r+ + C++kw +l+k+ ++i++  
  GBG79337.1 202 WTLEERVLLAKISGEDDALMGDAEgahslmTKGRRYDWIADRMKDEGYARTGEDCRKKWAELQKKVREIRDAC 274
                 99999999999999999999987667777799*********************************99999865 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MDGGSFTSQL YNESGGSQGM EVCEDMDTHL ESSRYRASLS AVAWQYVPDS QLSADTRSQF  60
VAQPAHPRAP YVVGSMDSSS PFRRGTYLPQ SHPHVTQPAV GGTALHSPQS LSARGGSSRT  120
DAGAWGSNPQ QSSHPSPHRP QVFQLKAKGE TGNTCATQDT SARSRECSVD DGGTGRPPKE  180
RGAGKWRQGG KSTAAPKKNT LWTLEERVLL AKISGEDDAL MGDAEGAHSL MTKGRRYDWI  240
ADRMKDEGYA RTGEDCRKKW AELQKKVREI RDACDGSGKQ PYRDLTTEER KKLNIPMTFE  300
RPLWDAMEWY RLKVAFTMDN YSAAGSEAGS EGGGTETSGG APKTRRTNSG KVRGSDVGQG  360
VTAMAAAMED TSRTLCEGLD RAAGTLASAT TEGAALMAAR QGDMATEIGH VAGAMRQGNS  420
VLELLVGVMA GRRGGAPAGE QGGG