PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79372.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 476aa MW: 52617.4 Da PI: 6.8776

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79372.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30	1.4e-09	243	296	17	70
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 m++++ r k ++ +W +v++++++ g+ r+++ C +kw+nl +++kk+ + ++ GBG79372.1 243 MGTAYTRMKPREWKWLDVAQRLKKVGIDREAEWCGKKWDNLMQQFKKVHHFQGL 296 5556667899999**********************************9987776 PP

Sequence ? help Back to Top
Protein Sequence Length: 476 aa Download sequence
MNLLFRLCSG RLSAASWTVI VNNHPDDDGA QVTAVAWSSK SPTPVWEPSG NNRDPPRQQY 60 RSPSLSRGAS ARPLWMQSPS PLSAISTAAR RRGECGETDC GIADVGDARD GREVWAEQRR 120 TLHRRREESI TRGVQRLRVE EEENDGDAPA MGADDQEWND DDGEGGEDDA GYISSFKQSS 180 MGGRGGKTRV CARNGRRGKK AARMGSDAEG DADAEEGRHF LSVDNMIAPI RAKRDQDVHL 240 QGMGTAYTRM KPREWKWLDV AQRLKKVGID REAEWCGKKW DNLMQQFKKV HHFQGLSGKH 300 DFFQFFGKER LLKGFNFNMD RAVNDEILGS TTKSHTINPK NVADTGAPGG VRPSSATSAD 360 PESVGDGDGG AGHDDNEDGL TRGSFETTGS PAGFGKRKSM RQQTFEALTE CMEKHGALVT 420 STMESNHKRQ CSIQIRQCEA LEAEVEVQKK HYAASDEVSK LMCHALLEIV KAIHER

Sequence ? help Back to Top

Protein Sequence Length: 476 aa Download sequence

MNLLFRLCSG RLSAASWTVI VNNHPDDDGA QVTAVAWSSK SPTPVWEPSG NNRDPPRQQY  60
RSPSLSRGAS ARPLWMQSPS PLSAISTAAR RRGECGETDC GIADVGDARD GREVWAEQRR  120
TLHRRREESI TRGVQRLRVE EEENDGDAPA MGADDQEWND DDGEGGEDDA GYISSFKQSS  180
MGGRGGKTRV CARNGRRGKK AARMGSDAEG DADAEEGRHF LSVDNMIAPI RAKRDQDVHL  240
QGMGTAYTRM KPREWKWLDV AQRLKKVGID REAEWCGKKW DNLMQQFKKV HHFQGLSGKH  300
DFFQFFGKER LLKGFNFNMD RAVNDEILGS TTKSHTINPK NVADTGAPGG VRPSSATSAD  360
PESVGDGDGG AGHDDNEDGL TRGSFETTGS PAGFGKRKSM RQQTFEALTE CMEKHGALVT  420
STMESNHKRQ CSIQIRQCEA LEAEVEVQKK HYAASDEVSK LMCHALLEIV KAIHER