PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG79679.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 662aa MW: 72443.8 Da PI: 10.1661

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG79679.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	25.8	2.7e-08	429	482	17	70
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 + +++ k ++ +We+v +++++ g++r + C +kw+nl +++kk+ + ++ GBG79679.1 429 RSHSFACMKTREWKWEDVRARLQSMGVTRDVVDCGKKWDNLMQQFKKVHKFQNL 482 4556666789999**********************************9987765 PP

Sequence ? help Back to Top
Protein Sequence Length: 662 aa Download sequence
MLFPPGALST TPVSLEKIVV FFDRRHASHI GAENFHRSFL CRRACSLKGR PPTSQCSPSN 60 GPHMADLLHR LPLLVLVVVL LLVVVFFHVC FVGLVPIAAR RRRSSKKADR MDRRLGNGRL 120 VGTTSGGSNR QHSAGSVAKR LYDPRSYAHL PSHEIPLPPS DDEGGDARSS TLPLGSGSTQ 180 EWAATQSCGG GRVETPWSYT SLLNEELCDD DGNAAVDLSF QLSSSSRLAV THTRIINPHP 240 GVDCADNTHG GSSGPRDGGL PQSLRERGGN RNESTSIVGG GVGARERPEW MQLSPASRSG 300 SGAPSARQRP EVLREEGADV QRDGRQLWAE CRQALERRQS QEGCNGSTRT KGTKLLLRRP 360 RGVTTLTVTT IATPTICRTL GRWGGRRRRV ERLRGRVPLQ KVDGARKWMT TRAEAMARAA 420 EISGRCETRS HSFACMKTRE WKWEDVRARL QSMGVTRDVV DCGKKWDNLM QQFKKVHKFQ 480 NLSDGKDYFK IASKDRRSQG FSFVMDRTVY DGMEAMTKGD HTIHPKNLAN TGATGGVQMP 540 AGAGAAADTM ATEGGGDAAD EEQGSTKDST FSAGSGGGYG KRKNMQQQTF EAVADVMEKH 600 GALMASTMDS ASKRQCSMMS RQCEILESEV EVQRKLYAAA DEANRRMCQA LMEIAKTIRE 660 RS

Sequence ? help Back to Top

Protein Sequence Length: 662 aa Download sequence

MLFPPGALST TPVSLEKIVV FFDRRHASHI GAENFHRSFL CRRACSLKGR PPTSQCSPSN  60
GPHMADLLHR LPLLVLVVVL LLVVVFFHVC FVGLVPIAAR RRRSSKKADR MDRRLGNGRL  120
VGTTSGGSNR QHSAGSVAKR LYDPRSYAHL PSHEIPLPPS DDEGGDARSS TLPLGSGSTQ  180
EWAATQSCGG GRVETPWSYT SLLNEELCDD DGNAAVDLSF QLSSSSRLAV THTRIINPHP  240
GVDCADNTHG GSSGPRDGGL PQSLRERGGN RNESTSIVGG GVGARERPEW MQLSPASRSG  300
SGAPSARQRP EVLREEGADV QRDGRQLWAE CRQALERRQS QEGCNGSTRT KGTKLLLRRP  360
RGVTTLTVTT IATPTICRTL GRWGGRRRRV ERLRGRVPLQ KVDGARKWMT TRAEAMARAA  420
EISGRCETRS HSFACMKTRE WKWEDVRARL QSMGVTRDVV DCGKKWDNLM QQFKKVHKFQ  480
NLSDGKDYFK IASKDRRSQG FSFVMDRTVY DGMEAMTKGD HTIHPKNLAN TGATGGVQMP  540
AGAGAAADTM ATEGGGDAAD EEQGSTKDST FSAGSGGGYG KRKNMQQQTF EAVADVMEKH  600
GALMASTMDS ASKRQCSMMS RQCEILESEV EVQRKLYAAA DEANRRMCQA LMEIAKTIRE  660
RS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	385	393	GRRRRVERL