PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79776.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family SBP
Protein Properties Length: 242aa    MW: 25840.8 Da    PI: 7.0919
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79776.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP87.41.7e-27176235261
                 -SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S CS
         SBP   2 CqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrs 61 
                 Cqv+gC +dl ++k+y+rrhkvC+ h++a +vl++g  qrfCqqC+rfh+l+ fDe+++s
  GBG79776.1 176 CQVDGCMEDLMSCKDYFRRHKVCQEHARALTVLTAGSPQRFCQQCGRFHTLNSFDEGRKS 235
                 ***********************************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 242 aa     Download sequence    
MGVNPVMAQG EEKRGSKISG SSDAIPIIPS ASAASGLAVV NDLKEQIECH GMGFPPGSSS  60
SQMIRDHHQQ QEQQHQAVRK QVMQPMITRG AVRTEASQSS WPIRLGEEDG SCDQMMCDCE  120
DGSKLGLGTG STDTGTGTGT GTGTETNTAG GQTKRGRGKT VGSVAFPLSN AVQASCQVDG  180
CMEDLMSCKD YFRRHKVCQE HARALTVLTA GSPQRFCQQC GRFHTLNSFD EGRKSFQGCI  240
NY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60030.13e-20SBP family protein