PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79797.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 433aa    MW: 48487.1 Da    PI: 5.2074
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79797.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix33.61e-1073150272
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                 W  +  l+L++ +r+ +e+l ++       k k+ +W +v+++m + g++r   qC ++wen+   ykk++ +ek+  
  GBG79797.1  73 WNLDDSLTLVRCKRDQDEALAAAghnfvrmKNKEWKWTDVANRMGALGVKRDWDQCMKRWENIFSWYKKVQLREKESV 150
                 8888999999****999999865333343379**************************************99999853 PP
Sequence ? help Back to Top
Protein Sequence    Length: 433 aa     Download sequence    
MRTTSDGDGG AEGGVDDDMC EDVDEVEEEE EEEEEMEDEV PPPSSGHKKT PAKKGIWKGR  60
GKGKAGSGGR TIWNLDDSLT LVRCKRDQDE ALAAAGHNFV RMKNKEWKWT DVANRMGALG  120
VKRDWDQCMK RWENIFSWYK KVQLREKESV KQSFFTLTPK QRNEEGYKFQ TDRRLFEAID  180
AGQHGNQTIH PPNLVDTGVS QLQGGGNGGG GETSASENGE ASGGQGSGSR SSGGFKFSKK  240
KNARQQAFEA VTDVMSAHST VVVDSVDRAS KRQCDVFQRQ CDIMEMEVKV QETQCEVLDA  300
GTVMFYEFKQ RRGEGDGRHV EVGDVVTRED WPHYEVDVDG RTCLMLAVHL GFARRLLRNV  360
VIFVTKISSA VPNRWTRGVD VTGDMVRMLV SVLAKEFEER LHHPSTFQVV VDAPLEPKDD  420
LHGDVHILRD DIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-06Trihelix family protein