PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG79870.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 379aa    MW: 40482.9 Da    PI: 8.0127
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG79870.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix27.67.8e-091802311970
    trihelix  19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 ++++rg + + +W++++k+m+  g  + +  C +kw+nl + ykki++ ++ 
  GBG79870.1 180 RSVGRGGRGGWKWDDIAKQMANAGRPKDADDCMKKWDNLFQNYKKIQRFQNA 231
                 56677888899**********************************9987665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 379 aa     Download sequence    
MASMQARAEL GAVQGGRGPA TEVLRRWYKP SLYTNLESWE TPLPPSNEEA KTEELATLPL  60
GSGSTQMLSQ MMRARGSASN EGGEFTSLLR TPAQPDLRDE PACRAPVRPG PTVENITRGV  120
SNMRAHNDGG DDDAGGSDDP DKGFRGDGEA GDDNDDIHIR PLGKRTGRGK GLSRGAVRGR  180
SVGRGGRGGW KWDDIAKQMA NAGRPKDADD CMKKWDNLFQ NYKKIQRFQN ACGEADSFRL  240
SKEERKEHNF KFRMDKVLYN KIHGGVQRNH TIFPPNVANT SSPDGVQLPR QGAAGGKSVS  300
SEAGGDGCPE ERYSARDFEN NAGSGVGGGV GGHGVPALLC VPSPHSVLTP DVIDLSGKLQ  360
NLHCGSGISG LCFGTGRPC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.12e-06Trihelix family protein