PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80119.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 464aa    MW: 50327.6 Da    PI: 5.0928
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80119.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.28.7e-13148232180
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 
                 rW + e+  L++ + e+++++++++       lk+ lW++vs++m+e  ++r+ + Ck+++ ++ + y+ +k++++   s++++ ++
  GBG80119.1 148 RWGEMETTMLLRRVYEVKTNMGENSeamgiapLKQRLWRDVSERMKEARYNREDEDCKNRFHSVCNNYRLVKDHNRW--SGNQKYWS 232
                 8************9999999998766777777*******************************************97..56666665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 464 aa     Download sequence    
MAAPTLMCGA SQNLQGRHLY TIELFFNVSS MLWRMIHAVE DGDFDSQEIF VQGLDQQLGN  60
SGSTPPAVRG MPDEGGMPCG VDIRHVDQTS TRHDVLCSEL GNASGGSKSI SVGKAVAEAA  120
APAVAEAVAP AAASGSVDGG KKKKVSNRWG EMETTMLLRR VYEVKTNMGE NSEAMGIAPL  180
KQRLWRDVSE RMKEARYNRE DEDCKNRFHS VCNNYRLVKD HNRWSGNQKY WSMDQATRKA  240
NSLDFMMRRD WYDIINVHEV DKDTINPNSL TDPGAGEHNM DNVHDTDVEV GDDDAEEEEA  300
VEDGSAIGGG SHTGGSGGGA EPPLYDCAGG GAGTSVPGQA GASTSASGGS TSSATVTETL  360
GRRKRCQQNA RELAMRAVTE AMRDHTSAQT RSDITHHQIL REQLTIQDRA AKLTCEVMRE  420
DIASRSSNSE KLGERLEKGY AILADAICSL GRKRARSPNA EEDE