PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80252.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 252aa    MW: 28065.1 Da    PI: 6.9323
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80252.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix43.77e-14103180272
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                 W+ +   aLi+a+r  + +l+         k ++ +W +v++++++ g+ r++++C++kw+nl +++kk+ + ++   
  GBG80252.1 103 WSVDDMIALIRAKRGQDAHLQgmgtayaHMKPRELKWLDVAQRLKKVGVDREAERCRKKWDNLIQQFKKVHHFQGHDD 180
                 99999*********66666663222211568**************************************998877654 PP
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    
MLVMHATGGR CGQRSDERFI HQREENDGDA PTVGADDQEW NDDDGEGRDD DAGYVSSFKQ  60
SSMGGRGGKT RACARNGCRG KKAAVKRSDA KGDADAEEGR QFWSVDDMIA LIRAKRGQDA  120
HLQGMGTAYA HMKPRELKWL DVAQRLKKVG VDREAERCRK KWDNLIQQFK KVHHFQGHDD  180
DEDGSTRGSS QITGSPAGFG KRKSTRQQTF EALTECMEKH GALVASTMES NSKRQCSIQI  240
WQCEALEAEV EV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.15e-08Trihelix family protein