PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG80267.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 507aa MW: 53938.1 Da PI: 7.9605

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG80267.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.1	1.3e-09	266	340	2	70
trihelix 2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 Wt +e +L ++ +e++ + +++ k + ++++++m+e+g++rs + C++kw +l k+ k+i++ + GBG80267.1 266 WTLEERVLLAKVSSEDDALMADAEgahcnmTKSRRYDWIADRMKEEGYTRSGEDCRKKWVELTKKVKEIRDACDR 340 888887777777777777777665666777999***********************************9998765 PP

Sequence ? help Back to Top
Protein Sequence Length: 507 aa Download sequence
MRGAGGAPAR MEGRTFTSEW CGDVGEQPNM DIGEVIGTQL EGDGYRASLS AQSWQYMDDH 60 PSTFLPPTHG GVHGSNGRPS LAMAVQDVYG CGGRGAYPTT MSNYGMHQGS SGVYGQCTQQ 120 PRMRAVPPRT DSPRWGCVPE HSVQSSQSSQ HRLQGLPPLS LPVNRRTATM GEDNSPGQAR 180 AQQIATGASG TRAAGGPSRG AGMGSAEEQQ QPSGMAEHVV DEVERPRSVL TIGGEGRTTA 240 SQGMGGGGEK RKAPKPSPQP KKNSIWTLEE RVLLAKVSSE DDALMADAEG AHCNMTKSRR 300 YDWIADRMKE EGYTRSGEDC RKKWVELTKK VKEIRDACDR SGKPTYWGFT TKERKKLGIN 360 MTFERALWDA MEWYRTKAAF SMDNTMASKD VKGGGCTAGN DGWSEGIGTD ASDSATKTRR 420 TSSGKSRGGD PAPSSPGLVT TMEESTRSVC DGLDRVASTL ARASAEGAAM LAARIGDVAT 480 EIGHVAGAMQ QGNSALEMLV GVMAGRA

Sequence ? help Back to Top

Protein Sequence Length: 507 aa Download sequence

MRGAGGAPAR MEGRTFTSEW CGDVGEQPNM DIGEVIGTQL EGDGYRASLS AQSWQYMDDH  60
PSTFLPPTHG GVHGSNGRPS LAMAVQDVYG CGGRGAYPTT MSNYGMHQGS SGVYGQCTQQ  120
PRMRAVPPRT DSPRWGCVPE HSVQSSQSSQ HRLQGLPPLS LPVNRRTATM GEDNSPGQAR  180
AQQIATGASG TRAAGGPSRG AGMGSAEEQQ QPSGMAEHVV DEVERPRSVL TIGGEGRTTA  240
SQGMGGGGEK RKAPKPSPQP KKNSIWTLEE RVLLAKVSSE DDALMADAEG AHCNMTKSRR  300
YDWIADRMKE EGYTRSGEDC RKKWVELTKK VKEIRDACDR SGKPTYWGFT TKERKKLGIN  360
MTFERALWDA MEWYRTKAAF SMDNTMASKD VKGGGCTAGN DGWSEGIGTD ASDSATKTRR  420
TSSGKSRGGD PAPSSPGLVT TMEESTRSVC DGLDRVASTL ARASAEGAAM LAARIGDVAT  480
EIGHVAGAMQ QGNSALEMLV GVMAGRA