PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80347.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 256aa    MW: 28285.7 Da    PI: 10.0716
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80347.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix384.3e-1241116270
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 W+ +++ aLi+ +         m++++ r k ++ +W + +++m++ g+ r + +C +kw+nl +++kk+ + ++ 
  GBG80347.1  41 WSVDHIGALIRSKCnqdahmqGMGHTYARMKPREWKWLDMAQRMKKVGVDRDADKCGKKWDNLMQQFKKVHHFNGL 116
                 9999*******999444444444455557789999**********************************9988765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MGGRGGKTKS SVRNGRRGKN AAGKGNDADG DGDVEGGRHF WSVDHIGALI RSKCNQDAHM  60
QGMGHTYARM KPREWKWLDM AQRMKKVGVD RDADKCGKKW DNLMQQFKKV HHFNGLYGKQ  120
DFFQLPTKER TSKGFNFNMD REVYDEILGS TGTNHTIHPK NVADTGASIG VRLPSTSSAE  180
LESVGDGDAG AGQDDDHDGS TKSSSQTTGS PSGFAKRKSM RQHIFEAMTA CMEKHRALMA  240
SMMESVNKRQ CSIQIR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-07Trihelix family protein