PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80377.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 445aa    MW: 47659.7 Da    PI: 6.8784
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80377.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.68.7e-10344422170
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwe..nlnkrykkikegekk 70 
                 rW + e+  L ++++e+++ ++++        lk + W+ v ++mre+g++r+  qCk+k++  ++   y+k+k++++ 
  GBG80377.1 344 RWAETETEWLCRFQNEVKDMMGDDTepygrarLKVGFWKIVEQRMREKGYNRKDDQCKNKFNlnQILDHYRKLKAHKGW 422
                 8**************88888886533333344****************************953389999****999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    
MAHYSQNHGL SCIDDWGYSE SQAGVDRYGG GGASSQVPGP NIPSEAVTGC YQHASPVVGG  60
GWPSPRPIED SDGTQVPPSA GGLQRPHDSE VFSEEPVFAY VRSPGVHVRQ VTSHATGQGH  120
SNVVTGGRGV CSPVTPVRMF RIGVGGEDEH SLRQSLRMRA MAMAEGVSTH TVQGAVGGCD  180
SPGPHVTLSG HGSPSPSSDG SRGSATVQAG EQCAPVAMSP IGQDSRGDSQ EATPDGGMTQ  240
QGSEEPPWSS QYVLNRIIRQ NKRGIPPADD VNYVADGDAA GAPHPAPQRT PPRPTPSAAA  300
ATATPSPMST GSGSRQLPSA VEPGAGTFTG VPPRSVLPPP NNDRWAETET EWLCRFQNEV  360
KDMMGDDTEP YGRARLKVGF WKIVEQRMRE KGYNRKDDQC KNKFNLNQIL DHYRKLKAHK  420
GWSGLPSYWD MNQTMRRRYN VDFVL