PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80384.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 330aa    MW: 36980.4 Da    PI: 9.3569
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80384.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix35.62.4e-1151123469
    trihelix   4 kqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 ++e+ +L +ar+       +  ++++r+++k++ W+ v+++m+e+gf+r   qCk k+ ++   y+++k +ek
  GBG80384.1  51 EDETTVLCRARNeakevlgDYTDAMGRASAKAGFWKMVADRMWEKGFNRDEDQCKGKFHQVMDFYRRLKIHEK 123
                 57899999999944444445555566789***************************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 330 aa     Download sequence    
MLVMHRGRPL DRGRAPSKEK CWGWRSSPEG TGRHGNVRPA DAAKNSESCG EDETTVLCRA  60
RNEAKEVLGD YTDAMGRASA KAGFWKMVAD RMWEKGFNRD EDQCKGKFHQ VMDFYRRLKI  120
HEKWSGLPSY WDMNQTKRKR YNVDFVLRRS WYDVIDPVEK DTYSISLSQL RDPRAQQEAR  180
EEAQEKGNYH TTTEGLSEEA GGGSSGGAAG GNRGSIFYST LGKRKRVASN ARETSMKAVT  240
GAMRDHTIAV TRSDRECAKM RCDVARELAI QQLEAQRQTV DKDIAARERV ASIMGGKVEN  300
GYMVLADAIR SLRSPRNCGG STQSDCTDSG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.11e-06Trihelix family protein