PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80749.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 261aa    MW: 29599.8 Da    PI: 9.2375
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80749.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix384.2e-126571970
    trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70
                e ++r++lk++ W+ v ++m e+g++r  +qCk+k++++  +y+++k++ek 
  GBG80749.1  6 EVYGRARLKAGFWKIVEQRMXEKGYNRRDEQCKNKFNQIMEYYRRLKAHEKW 57
                5678999*****************************************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
MGEDTEVYGR ARLKAGFWKI VEQRMXEKGY NRRDEQCKNK FNQIMEYYRR LKAHEKWSGR  60
QSYXDMNKAQ RKRYNVXFVL KRSWYDIIDP XEKDKDSIDL XNLMDSXADE EXLEDEDDAA  120
DHGXGAGGAS GDXPAGXGGS TSGSQGAGIE PTLGKRKRGY VSARESSVQS VTIAMRAHTV  180
ALXRSDKECX VMXIEAXRAI XTQQVEARRE LVLQEIASRX RIADRMGERV ERGYSALADA  240
IRSLRSRRGX SRESPSSSDS R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-06Trihelix family protein