PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG80963.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 489aa    MW: 52967.2 Da    PI: 6.2409
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG80963.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix41.43.8e-13235309168
    trihelix   1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 
                 rW + e++ L ++r+e++e ++++        lk++ W+ v ++mr++g++r  +qCk+k++++  +y++++++e
  GBG80963.1 235 RWGETETQWLCRFRNEVKELMGQETeaygrarLKAGFWKIVEERMRAKGYNRDHEQCKNKFNQIPDYYRRLRAHE 309
                 8**************99988885422333334***************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 489 aa     Download sequence    
MVTDCVTDAP HSDVVTHGPI LSSPVTPVLK FRIGLCGEDE HSLRQRLRMR AMAMAEGLTP  60
SMNSDTMPSQ QHESGSAATI LPITQMTHLV SPESSCDGAV MQQQCPPAAS SEYVLNRIIQ  120
DIEAGVRTPE SDYVNVGGEA VSLHTSPSHT PSALHTPGGV PAATPSPFVR ESGTHDTAPR  180
SGSSPSPPAA IPSLINGNVS SHTPPSVAVP SGTRAGGPSR NPRRRPSSGE KSTDRWGETE  240
TQWLCRFRNE VKELMGQETE AYGRARLKAG FWKIVEERMR AKGYNRDHEQ CKNKFNQIPD  300
YYRRLRAHEG CWYDIIHPVE KDKDSINLTN LMDSGADDER VENGEGVSDR DGAMEGGSED  360
NGSGYGVSPG GSQSTGFEPT LGKRKRGAAN ARESSVQAVT AAMRAHTTAL TRSDMECAKM  420
RCQATRDIAK QQADANRELL QQDIASRERI ATIMGDKVEN GYYVLADAIR XLXPPTHSPS  480
TDPESGDDR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33240.13e-07Trihelix family protein