PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG81073.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 236aa    MW: 25724.5 Da    PI: 9.0136
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG81073.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.74.1e-1061142279
    trihelix   2 WtkqevlaLiearremeerlrrgk......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstc 79 
                 W+ +e  aL +++ e++    +++      +++ ++e++s++mr++g++r+ + C++kw +l  + k+i++  ++  s++s  +
  GBG81073.1  61 WSADEQVALARVYGEDDALCASASgphrcmRRQDRLEWISNRMRAEGYRRNGEDCRKKWASLMEKAKEINDKCGRS-SGES-YW 142
                 999999999999999999988775566667999*******************************999999998874.3333.45 PP
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    
MEASSLPLPP VSLPDGPPSP PPSNTAPRSG EEPSTTTDAP AGESDARRAT NKPPQKSSQL  60
WSADEQVALA RVYGEDDALC ASASGPHRCM RRQDRLEWIS NRMRAEGYRR NGEDCRKKWA  120
SLMEKAKEIN DKCGRSSGES YWEMTTEKSR ELGVHPAFDK VLSDAMGWAL RKLSVTCDHT  180
LASDNMQSPT DNVISMRGRA GEGASSGGGG RGKTARDASE KSDSRTKSKR GRTRER