PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG81981.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 383aa    MW: 42414.3 Da    PI: 6.1164
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG81981.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix347.6e-11161238272
    trihelix   2 WtkqevlaLiearremeerlrrg.......klkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 
                 W  +  l+L++ +r+ +e+l+++       k k+ +W +v+++m + g++r   qC ++wen+   ykk++ +e++++
  GBG81981.1 161 WNLDDSLTLVRCKRDQDEALEAAghnfmcmKNKEWKWTDVANRMGALGLKRDWDQCMKRWENIFSWYKKVQLREESGK 238
                 8889999*******999999986444554469999***********************************99999873 PP
Sequence ? help Back to Top
Protein Sequence    Length: 383 aa     Download sequence    
MVRISFRSDL IWNQFRTRCR QGEPSIRCEG RRSITVGVQQ PAFPLNNGGV GGPLARVPGG  60
GRGTAATTGG RAESREANVV EHIIARVSTM RATSDGDGGG EGRVDDMCED VNEVEEEKEE  120
EEEMEDEVPP PSSGRKKTPA KKATLKGWGK GKAGSEGRTI WNLDDSLTLV RCKRDQDEAL  180
EAAGHNFMCM KNKEWKWTDV ANRMGALGLK RDWDQCMKRW ENIFSWYKKV QLREESGKQS  240
FFTLTPKQRN EQGYKFQMDR RLFEAIDAGQ HGNQTIHPPN LVDTGVSQLQ GGGNGGGGET  300
SASENEETGR GEGSGSRSSG VPNRWTGGVD VTGDMVRMLV SVLAKEFEER LHRPSTFRVV  360
VNAPLEPKDD LQGDVRILRD DIF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G31270.12e-06Trihelix family protein