PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82085.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 790aa MW: 86962.9 Da PI: 4.9979

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82085.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	38.9	2.2e-12	311	389	1	72
trihelix 1 rWtkqevlaLiearremeerlrrgk.......lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrt 72 +W + e+ L ++r+e+++ ++++ lk + W++v ++m+ +gf+r++ qCk+k++ l +y+ + ++ + GBG82085.1 311 QWGETETEWLCRFRNEVKSLMGEETeplgrarLKTGFWKDVEQRMKGKGFNRNADQCKNKFNTLLDYYRSHGSWWRGAS 389 7************99999997533444444***********************************9999888764 PP

Sequence ? help Back to Top
Protein Sequence Length: 790 aa Download sequence
MALRLRVAAR CLIGQRLRTG TASGGDALRC ASTWRSINVA TTTSASIIAR SPFNLDARLN 60 ERKGPARGDI RRSLILLCIV GAERKGPISL RQFSSPVSPV GGFRIGLSGE DEVALRQRLR 120 MRAMAMLDGL SMSPDERGMN GLMTSLARHD RRGHGSPGPS TVSSVDNETV GCRSSTSPTA 180 LSAIRHASFP LSPEPIPPDG SPQPLRARTG SPEYIINRII RDNEAGVPPV EWPTRMALEG 240 DAVADPTAAG RTPPPRVPFE GHPVSGRCAV HLAAHSMQCG ELGGHVHDTA IRRPPNTTTV 300 NGEEYGSVTD QWGETETEWL CRFRNEVKSL MGEETEPLGR ARLKTGFWKD VEQRMKGKGF 360 NRNADQCKNK FNTLLDYYRS HGSWWRGASR QAHDCGCQLF RTTLGPALAL NLNLHSNRCL 420 HSRRQTPRRK AGVHGAVEPI QVRDGDDVKD DVEAEGNEEW AGEFGDDDVV VDYENDDGEE 480 EGIVSSLDGG SRGKRTADDG IGEEEEEEEE EDWDEEWSAM GDECLGGIDL GDSGELGKTA 540 LAVAEGILQD HPGFSSDFSL YGLQVAERSS SANIRVALDK LSDVYGAPTC EEMEVYLVLY 600 WQKLKDEVRL LRTSARGARR EGPFSQYPDP DDIHVEVTSP GVEREVKVPS ELLRFKELPM 660 TVVYRERTVR SGDGMGVENG ETSHKKTAGG DSVDQNREAA TEVEDEAKGR EEGVVPVMTE 720 WVDEGIEREE VLSFVEHDEV SGTTIWQVAD VRLNREAGGR KGTKLTRKQR DRRIVIPLGD 780 LSFVRLYLDF

Sequence ? help Back to Top

Protein Sequence Length: 790 aa Download sequence

MALRLRVAAR CLIGQRLRTG TASGGDALRC ASTWRSINVA TTTSASIIAR SPFNLDARLN  60
ERKGPARGDI RRSLILLCIV GAERKGPISL RQFSSPVSPV GGFRIGLSGE DEVALRQRLR  120
MRAMAMLDGL SMSPDERGMN GLMTSLARHD RRGHGSPGPS TVSSVDNETV GCRSSTSPTA  180
LSAIRHASFP LSPEPIPPDG SPQPLRARTG SPEYIINRII RDNEAGVPPV EWPTRMALEG  240
DAVADPTAAG RTPPPRVPFE GHPVSGRCAV HLAAHSMQCG ELGGHVHDTA IRRPPNTTTV  300
NGEEYGSVTD QWGETETEWL CRFRNEVKSL MGEETEPLGR ARLKTGFWKD VEQRMKGKGF  360
NRNADQCKNK FNTLLDYYRS HGSWWRGASR QAHDCGCQLF RTTLGPALAL NLNLHSNRCL  420
HSRRQTPRRK AGVHGAVEPI QVRDGDDVKD DVEAEGNEEW AGEFGDDDVV VDYENDDGEE  480
EGIVSSLDGG SRGKRTADDG IGEEEEEEEE EDWDEEWSAM GDECLGGIDL GDSGELGKTA  540
LAVAEGILQD HPGFSSDFSL YGLQVAERSS SANIRVALDK LSDVYGAPTC EEMEVYLVLY  600
WQKLKDEVRL LRTSARGARR EGPFSQYPDP DDIHVEVTSP GVEREVKVPS ELLRFKELPM  660
TVVYRERTVR SGDGMGVENG ETSHKKTAGG DSVDQNREAA TEVEDEAKGR EEGVVPVMTE  720
WVDEGIEREE VLSFVEHDEV SGTTIWQVAD VRLNREAGGR KGTKLTRKQR DRRIVIPLGD  780
LSFVRLYLDF