PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82090.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 344aa    MW: 37385.3 Da    PI: 8.2961
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82090.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix79.45.4e-2577158286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W ++e++ Li++rrem+++++++k++ +lW+ +s+km+e g+ r+p +C++kw+nl k+ykk k+++++ ++ +    + +++l+
  GBG82090.1  77 WGQDEIMSLINLRREMDTQFNSSKSNRHLWKIISSKMKEMGYDRNPMMCTDKWRNLLKEYKKAKQHDRRVACSK---LACYEDLD 158
                 ********************************************************************986654...45676665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 344 aa     Download sequence    
MEEEGQERGG GGGGGGGGGG GAGGVVVGGE AVGPGGGGGG MVAIVQAAAA GETQMLGMQE  60
RLEELEPKVP RKRAETWGQD EIMSLINLRR EMDTQFNSSK SNRHLWKIIS SKMKEMGYDR  120
NPMMCTDKWR NLLKEYKKAK QHDRRVACSK LACYEDLDAL LGARVKAPSS SRSPVKTPMG  180
RVITVKYRDV VRRFGIDAPS EAIKEALRSA FGLRTRRAFW LEDEGGIVRA ISRDMPAVNY  240
SLLVDEGITI TIFSSASTHP CWPSNSQDQP SGQMSISSVE TREERTLYSN DDLRELLNQR  300
GWPSLRLAGP GVQGSLTKDI DYVDDLIPGA TYQRGGSATV PMNT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13450.22e-80Trihelix family protein