PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82098.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 280aa    MW: 31343.7 Da    PI: 9.6261
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82098.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix39.41.6e-12102173266
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkike 66 
                 W+ + + aLi+a+ + + +l+       r k ++ +W +v++++++ g+ r + +C++kw+nl +++kk+ +
  GBG82098.1 102 WSVNDIIALIRAKCDQDAHLQgmghvyaRMKPREWKWLDVAQRLKKVGVDRDADRCRKKWDNLMQQFKKVHH 173
                 9999**********888888854444435689999**********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 280 aa     Download sequence    
MGLRSGQEES ITRGVQRLRV GEQENDGDAA VVDVDVQEWN DNASEGGEED AGYVSPFKKS  60
SMRGRGGKTK ACARNGRRGE KAAGKGSDAE GDVDVEGGHH FWSVNDIIAL IRAKCDQDAH  120
LQGMGHVYAR MKPREWKWLD VAQRLKKVGV DRDADRCRKK WDNLMQQFKK VHHFRGFFGK  180
QDFFQFSGKE RTSKGFNFNM DRAVYDEILG LNARNHTINP KNVTDTSAPG GVRLPSASSA  240
DPESVGDGEA GYRAQRRRRR VDERFFSNGE KVNRPPLNDG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.13e-09Trihelix family protein