PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82121.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 707aa MW: 76386.5 Da PI: 6.4238

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82121.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	33.8	8.9e-11	271	355	1	80
trihelix 1 rWtkqevlaLiearr......emeerlr.rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80 rW ++e+ +L++a++ ++++ r +gk +++ We++s+++++ +r++ Ck +w+ +++ y ++ +++ + s+++s + GBG82121.1 271 RWGEDETTVLLKAKSeqlaarALDSEGRgKGKEAGKVWEAISAQLKASNWKREADDCKRRWNTVKRWYTQVVDNDTR--SGRQSYWT 355 8************5555553333333357899***********************************999997..45555665 PP

Sequence ? help Back to Top
Protein Sequence Length: 707 aa Download sequence
MTYSCPILRP SASTFRDQHH APLGGIRKDM PVSHACKPPL RSDMWPVDGQ SVVGSGSSML 60 ASPVVMNHVN SQLGGIRSVH VNPHNGSAIA AASPDVTGQS QYWACSLPLH NDCVGPAERG 120 TTSDVHQEIL SPFGSLPTSS SALSQAVCNP ASSGGVAVAG EGVSLPVNNG GDNRDPAPPH 180 NSEDLDMHGG DPDMHCGEGN VFPQSVTGDR HPGCPPVPAG SGLDANGVQP VQVNRQAGRD 240 HPPPAGTVGE AAAATGTDNA SARGKRVTGG RWGEDETTVL LKAKSEQLAA RALDSEGRGK 300 GKEAGKVWEA ISAQLKASNW KREADDCKRR WNTVKRWYTQ VVDNDTRSGR QSYWTMTPKE 360 RAAAKLEFNM RKTWFDILQS YNTRNQTVYP DRVVDTGEEE EVGHNPAPQR QEGENNGEAE 420 YGSMGGSVSE GSNLTSATGS TPPNRRRRNM NAREQSLQIV CTAMTNNTNA VREAAAEQGR 480 MNRSCAELHC GTLTELSARE LATQRELAEL TREIMREEMA SRERTADTFA NKMGDGYALL 540 ASALRCFGEA SSSRRRRRQS SSDESFSASQ EFTVVVTAII ARYDQMETQY TFACMEIARL 600 SDENAKLTVD KQRLVRGVHC LARQRDQARA EAKRFRQAAG MEADLSAELE GMQIRHEEML 660 SSSLIHASPV GDTAGCSMQR RCRSRDRGVD SGDSDVSSGY LDVGEDV

Sequence ? help Back to Top

Protein Sequence Length: 707 aa Download sequence

MTYSCPILRP SASTFRDQHH APLGGIRKDM PVSHACKPPL RSDMWPVDGQ SVVGSGSSML  60
ASPVVMNHVN SQLGGIRSVH VNPHNGSAIA AASPDVTGQS QYWACSLPLH NDCVGPAERG  120
TTSDVHQEIL SPFGSLPTSS SALSQAVCNP ASSGGVAVAG EGVSLPVNNG GDNRDPAPPH  180
NSEDLDMHGG DPDMHCGEGN VFPQSVTGDR HPGCPPVPAG SGLDANGVQP VQVNRQAGRD  240
HPPPAGTVGE AAAATGTDNA SARGKRVTGG RWGEDETTVL LKAKSEQLAA RALDSEGRGK  300
GKEAGKVWEA ISAQLKASNW KREADDCKRR WNTVKRWYTQ VVDNDTRSGR QSYWTMTPKE  360
RAAAKLEFNM RKTWFDILQS YNTRNQTVYP DRVVDTGEEE EVGHNPAPQR QEGENNGEAE  420
YGSMGGSVSE GSNLTSATGS TPPNRRRRNM NAREQSLQIV CTAMTNNTNA VREAAAEQGR  480
MNRSCAELHC GTLTELSARE LATQRELAEL TREIMREEMA SRERTADTFA NKMGDGYALL  540
ASALRCFGEA SSSRRRRRQS SSDESFSASQ EFTVVVTAII ARYDQMETQY TFACMEIARL  600
SDENAKLTVD KQRLVRGVHC LARQRDQARA EAKRFRQAAG MEADLSAELE GMQIRHEEML  660
SSSLIHASPV GDTAGCSMQR RCRSRDRGVD SGDSDVSSGY LDVGEDV