PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82144.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 597aa MW: 63880.5 Da PI: 6.3818

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82144.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	39.2	1.8e-12	416	494	1	71
trihelix 1 rWtkqevlaLiearremeerlrrgk........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkr 71 +Wt++e +L+ +++e + ++ r++ +k +We vsk++ +rg+++s + k kwe+++ ry ++ +++ GBG82144.1 416 KWTEEESVTLVHVKSEFDMEMVRNSvgiaqkskPEKEKWEVVSKRLGDRGVHKSGAEAKRKWEQIKSRYNRVVFHNRHV 494 7************99999998644444444499***********************************9999975 PP

Sequence ? help Back to Top
Protein Sequence Length: 597 aa Download sequence
MAFWRNAAES GTGVQRCEDV EVEGCEDARN SHVPDRSLVL GLGTARTRGE VNCESPVPRG 60 TVQLLPPHLH PVRDEGAGVY AGDYLIEGAG VYARDYLIDE GRHFYGGGHG ATQGHHAWGN 120 QWLETVLDEA QEYGMPRIHQ AVQPPRHMDP SHHMEAAHGV QPPRHMEPSH HMDAAHGVQP 180 PRHMEPLHHM EAAHGVQPPR HMEPCHHMEA AHGVQPPRHM EPAHHVEVAC APMNLQAPMN 240 WNTPVNLHDS NVHAVHGGSS DWFQTLVHPH AGFSDFSTVS TGNGTMHDVD VVHDVDYDSS 300 PDAAGSAPVP DSEPAAVVGG KREGVGGCGR VKRAAASKAA DTLSMLMASA DNEAVEATAP 360 RAAANMPGDE VPAPGAAANS ERGDTAVKGG GNEAAKGDGD TAAKGGGDKG VKVGGKWTEE 420 ESVTLVHVKS EFDMEMVRNS VGIAQKSKPE KEKWEVVSKR LGDRGVHKSG AEAKRKWEQI 480 KSRYNRVVFH NRHVSGSKNF FDMTCAEREE NKIGIALRES VFKAMDSYYH DDPSANPKNL 540 LDNGVPVGAQ SAGSASGNAS GSGHAEAGYP DSMAENARLG AGRRRKSARE GAMGESD

Sequence ? help Back to Top

Protein Sequence Length: 597 aa Download sequence

MAFWRNAAES GTGVQRCEDV EVEGCEDARN SHVPDRSLVL GLGTARTRGE VNCESPVPRG  60
TVQLLPPHLH PVRDEGAGVY AGDYLIEGAG VYARDYLIDE GRHFYGGGHG ATQGHHAWGN  120
QWLETVLDEA QEYGMPRIHQ AVQPPRHMDP SHHMEAAHGV QPPRHMEPSH HMDAAHGVQP  180
PRHMEPLHHM EAAHGVQPPR HMEPCHHMEA AHGVQPPRHM EPAHHVEVAC APMNLQAPMN  240
WNTPVNLHDS NVHAVHGGSS DWFQTLVHPH AGFSDFSTVS TGNGTMHDVD VVHDVDYDSS  300
PDAAGSAPVP DSEPAAVVGG KREGVGGCGR VKRAAASKAA DTLSMLMASA DNEAVEATAP  360
RAAANMPGDE VPAPGAAANS ERGDTAVKGG GNEAAKGDGD TAAKGGGDKG VKVGGKWTEE  420
ESVTLVHVKS EFDMEMVRNS VGIAQKSKPE KEKWEVVSKR LGDRGVHKSG AEAKRKWEQI  480
KSRYNRVVFH NRHVSGSKNF FDMTCAEREE NKIGIALRES VFKAMDSYYH DDPSANPKNL  540
LDNGVPVGAQ SAGSASGNAS GSGHAEAGYP DSMAENARLG AGRRRKSARE GAMGESD