PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82193.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1058aa MW: 113863 Da PI: 9.393

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82193.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	32.8	1.8e-10	402	478	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekk 70 Wt ++ aLi+a+r+ +++l r k k +W++v k++ + g+ +r+++ C +kw+nl +++k + + ++k GBG82193.1 402 WTVEHMIALIRAKRDQDSHLAglahttgRMKTKTWKWDDVEKRLVHMGVtSRKAVDCGKKWDNLYQQFKTVHKFMGK 478 ************888888855554335689999*****99999799****************9987776 PP

Sequence ? help Back to Top
Protein Sequence Length: 1058 aa Download sequence
MPRRFTIGGD RRGTALSVRR VSRRRCSGEH RTSSAGSCSG RAVPACSTTV EKYVFCKRPP 60 AASCEIASIS FVGVFPLAPF VSVRRACHSA SASFVSAALS FMADLYRRLP LLLLAVVVFH 120 ICCLLRVPGR KQTRRTSKTA RKMERVQTRT TLSVGAAGSS RQRCRSAEAV RRPYDPTLYS 180 HLPSHEIPLP PSDNDGDDPR CSTLPLGSGS TQDWMGSQLH GQASTPTYTD LLEGRTPTGY 240 DPGLVDLSFG LRSGSVEEVT RTVIMSPASG ATHTPTPVTT RTGGSVPCRM MTAGGTVDGR 300 RPNEEWSATE VVGRKGVAKI VVGADNILGD EDGAVAEDCE ADDGAGNDDE EDDEEMEIRP 360 VGRKRGGSRA AKKLPETRTG RRGKKGVEDA SAGEGSKSRD FWTVEHMIAL IRAKRDQDSH 420 LAGLAHTTGR MKTKTWKWDD VEKRLVHMGV TSRKAVDCGK KWDNLYQQFK TVHKFMGKSG 480 KPNFFTLTPG ERKERGFDFR RDERVYSEMA AMTRSDHTIH PTNLADNGAT GGVQMPGPRG 540 GRNESGGSEG GGDGQDDDQG STGDSISGGG VGGGSKRKNV RQQTFDTIAD VMKEHGSLMA 600 TTVDSASKRQ CSILTRQCDI LEREVEVQKE HYVKADQANL MMCKALMEIA KAIRERSKDG 660 GAGDGGETNK GRGHISKSKR QRIDDTSSSQ TDDFVADEVA MVDAQGTAGV ARLGFERDGV 720 SREQLLAVKR SVVGGVARTV PRTPNTAGVV VTGARVVGQL SAAAGQGQPR QALPLQHVLA 780 SGGGHTATSQ KGDATASVSR MAAADHTAKG GVVEGAERGG VDDVGRDDGR RDGKREGNDG 840 DGRPLLPRGK GMPKEDELEE KAKLWVDCDA FWGQGPGKPL REVVSECTDY FVAIANGDAG 900 AEPPSMLIMP PNDVPRFKID DPAQRDLALR RARSVERVVL RTIHGWIFKS QSRSTGFSRA 960 ESYITVDFAM GLARAVWQAL EWSRVVSPAL VYHTLAMKMD SGVDLLRAGT QQAPKNPSLT 1020 FPIPMPTDLR GNTAAARTTS MNNGKNKTPT SLPITYDN

Sequence ? help Back to Top

Protein Sequence Length: 1058 aa Download sequence

MPRRFTIGGD RRGTALSVRR VSRRRCSGEH RTSSAGSCSG RAVPACSTTV EKYVFCKRPP  60
AASCEIASIS FVGVFPLAPF VSVRRACHSA SASFVSAALS FMADLYRRLP LLLLAVVVFH  120
ICCLLRVPGR KQTRRTSKTA RKMERVQTRT TLSVGAAGSS RQRCRSAEAV RRPYDPTLYS  180
HLPSHEIPLP PSDNDGDDPR CSTLPLGSGS TQDWMGSQLH GQASTPTYTD LLEGRTPTGY  240
DPGLVDLSFG LRSGSVEEVT RTVIMSPASG ATHTPTPVTT RTGGSVPCRM MTAGGTVDGR  300
RPNEEWSATE VVGRKGVAKI VVGADNILGD EDGAVAEDCE ADDGAGNDDE EDDEEMEIRP  360
VGRKRGGSRA AKKLPETRTG RRGKKGVEDA SAGEGSKSRD FWTVEHMIAL IRAKRDQDSH  420
LAGLAHTTGR MKTKTWKWDD VEKRLVHMGV TSRKAVDCGK KWDNLYQQFK TVHKFMGKSG  480
KPNFFTLTPG ERKERGFDFR RDERVYSEMA AMTRSDHTIH PTNLADNGAT GGVQMPGPRG  540
GRNESGGSEG GGDGQDDDQG STGDSISGGG VGGGSKRKNV RQQTFDTIAD VMKEHGSLMA  600
TTVDSASKRQ CSILTRQCDI LEREVEVQKE HYVKADQANL MMCKALMEIA KAIRERSKDG  660
GAGDGGETNK GRGHISKSKR QRIDDTSSSQ TDDFVADEVA MVDAQGTAGV ARLGFERDGV  720
SREQLLAVKR SVVGGVARTV PRTPNTAGVV VTGARVVGQL SAAAGQGQPR QALPLQHVLA  780
SGGGHTATSQ KGDATASVSR MAAADHTAKG GVVEGAERGG VDDVGRDDGR RDGKREGNDG  840
DGRPLLPRGK GMPKEDELEE KAKLWVDCDA FWGQGPGKPL REVVSECTDY FVAIANGDAG  900
AEPPSMLIMP PNDVPRFKID DPAQRDLALR RARSVERVVL RTIHGWIFKS QSRSTGFSRA  960
ESYITVDFAM GLARAVWQAL EWSRVVSPAL VYHTLAMKMD SGVDLLRAGT QQAPKNPSLT  1020
FPIPMPTDLR GNTAAARTTS MNNGKNKTPT SLPITYDN

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	677	682	KSKRQR