PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82601.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 339aa    MW: 37455.5 Da    PI: 5.5318
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82601.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix31.64.2e-1083160271
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkr 71 
                 Wt +   aL++a+r        ++++++r k k  +W++v k++ + g+  r+++ C++kw+nl +++k + + +++ 
  GBG82601.1  83 WTVEYMIALVRAKRdqdlhlaGLGHNYGRMKTKTWKWDDVEKRLVQMGVtGRKAVDCRKKWDNLYQQFKSVHKFMGES 160
                 9999999999999966666666667777899**************9999679******************99988774 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MNVGAEDICV DCDGGGGEEC AADDDDNDKD EDDDGEMDIR PVGRSRGGSR ATNKFTKPGA  60
GRKGKNGVED TSAAEGAKSK DFWTVEYMIA LVRAKRDQDL HLAGLGHNYG RMKTKTWKWD  120
DVEKRLVQMG VTGRKAVDCR KKWDNLYQQF KSVHKFMGES KKPNFFTLTS GERKEQGFDF  180
RMDERVYSEM KAMSRGDHTI HPTNLADTGA AGGVQMAAPR GGRNESDASE GCGDGQDDDQ  240
GSTRDSAFNV GGGGGAGKWK NVRQQTFDAM ADVMKEHENL MASTVDSASK RQCSILTRQS  300
DILEREIEVQ KEHYEKADQT NFMMCNALME IAKAIRARS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35640.17e-06Trihelix family protein