PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82614.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 187aa    MW: 20861.4 Da    PI: 9.7903
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82614.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix361.9e-11118187264
    trihelix   2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykki 64 
                 W+ +e ++L++ +re e +l        + + k+ +W +++k+m+ +g  + +  C +kw+nl + ykki
  GBG82614.1 118 WSTDEQMLLVRCKREQEMHLAglghnygQMRTKERKWVDIAKRMANGGSPKDAHDCMKKWNNLFQNYKKI 187
                 **************77777663333222568*************************************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 187 aa     Download sequence    
MAGMKTRVVL PAAEGRRRPA TTEPSRRYDP SMYNHLPSWE TPLPPSSDDN CCGGDDADKG  60
FWEKVEAVDY DDENVVRPVG KTGGRGIGRS NRGGRGRSVG RGGRGGVTED GGKSATYWST  120
DEQMLLVRCK REQEMHLAGL GHNYGQMRTK ERKWVDIAKR MANGGSPKDA HDCMKKWNNL  180
FQNYKKI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.18e-06Trihelix family protein