PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG82737.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 491aa    MW: 52671.4 Da    PI: 6.3089
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG82737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix30.78.4e-103123582470
    trihelix  24 gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 
                 +  ++ +W +v +++++ g+er++++C +kw+nl +++kk+ + ++ 
  GBG82737.1 312 SDVEAEKWLDVEQRLKKVGVEREAERCGKKWDNLMQQFKKVHHFQGL 358
                 457899**********************************9887665 PP
Sequence ? help Back to Top
Protein Sequence    Length: 491 aa     Download sequence    
MGGRQVVCRS AGGEGGGQRA GQSPSRGSRA VERSEYAHLP PHLQPLPDTS DEEEDDRRSH  60
AVLLGSGSTQ EWTATELCGS REPSYGQSYT QLLKQGLSGD EGDGGVNLTF GLCSGRSSSS  120
MRTVLVDNRP DDDGSHVTAV AQPSKSPTSS VRVASGNNRD PHTQQYRAPS ASRGASARPS  180
WMLSPSPLSG NSSAARNRGE CGEHDCGIEE RGDKSDGREV WEEQRRMLHP RRQESITRGV  240
QRLRVVDDEN DGDAPDVGGN DEDLNDDDCG GGEDDAGQVS PSKQSSIGGK GGRVKAFVRN  300
GQRGKKAMGK GSDVEAEKWL DVEQRLKKVG VEREAERCGK KWDNLMQQFK KVHHFQGLSG  360
KQDFFKFTGK ERLSKGFGFN MDRAVYDEIL GSTAKSHTIN PKNVADTGAP GGVRLPSANS  420
GDPESVGDRD AAVGLDDDDD GSTRGSSQTT GGLAGFGKRK SMRQQTFDAL SECMEKHGAL  480
VASTMESNNK R