PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82771.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 1037aa MW: 112467 Da PI: 6.6531

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82771.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	29.8	1.6e-09	312	386	2	69
trihelix 2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 W+ + aL++a+r ++ ++ r k ++ +We+v ++++ g++r ++ C +kw+nl +++kk+ + ++ GBG82771.1 312 WSVGDTVALVRAKRdqdlyiaGLGISFARMKTAAWKWEDVRVRLQAMGVTRDAVDCGKKWDNLMQQFKKVHKFQN 386 8888889999999966666656666777899**************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 1037 aa Download sequence
MVGRLPNGRP AGTSGGSINR QRSAGSVAKQ PYDPTLYAHL PSHEIPLPPS DDDGGEARSP 60 TLPLGSGSTQ DWAATQSCGG RGVETQWSYT SLLNEGLCDD DGDATVDLSF QLSSSSGAAA 120 THTRIINSHP GGDCEENTQG AVCGPRDGGL PQSVRDGGGD RNNSSLSVGG GFGARKRPDR 180 MRLSPAARSG PDATRGRQPA EDLIGGGPDV QRDGRQVWVE CRQELHRGET ETITRGVQGL 240 HVDEVEDVAV DEGQGCDDVD GEDGCKSDDL PDIRPLGRRA TRGGSGAKKG PATKPRRTKN 300 MDDDGEGGRN FWSVGDTVAL VRAKRDQDLY IAGLGISFAR MKTAAWKWED VRVRLQAMGV 360 TRDAVDCGKK WDNLMQQFKK VHKFQNLSGG KDYFRLASRD RRSEGFSFVM DRSMCDEMEA 420 MTKGDHTIHP TNLADTGAAG GVQMPAGAGG SGGTMGGDGG GETADEEQGS TKNSSFSAGS 480 GGGYGKRKNM RQQTFKAVAD VMEKHGALMG SIMDSTSKRQ CSMMSRQCEI LESEVELQRK 540 HYAAADEANR MIIKLSLRHI QYWRSVHTVT SDEIRAGRHL PFVLDAPRSH RMVAPVFALH 600 EWDFCTVVVD RARRSSSKHK DVHAEQTVLI VADNSTSFGG GRRHVPKLKR LRSEEPSPKD 660 PVRRGRYWAA SNEDEDDDVF TTEEEAADDT VAAPRGSSLQ TKNDQAAPRR LLTPPPERQQ 720 GRGQSNTKAK EIVVDVGDED NKPLESLRQR NAMQGATATG VRLRAAHEER PPQGAMPSTP 780 SQPRLCNTAA DGGSTERGGG AVAQQEARVA SAGAGAGCSG NVAVVAGARE EVPVVDREVA 840 RGENKGEKED DDPLLSRERR GGLARDLADR ARLWVDDKAF WTTGKGRRLY DIVHRMREHF 900 EAVASGVQAP VVSRSVVMPK SATTLTRIVD PAQLQQAIIR RGAAENIVLR LLHGWVFKSG 960 NRPRGYNLAF QYALESVATN LVRVMWYGEE WSNVVSVPVC AHTIDLNMDM PLWFVGMNID 1020 DRPEDDDMAT YQESTVM

Sequence ? help Back to Top

Protein Sequence Length: 1037 aa Download sequence

MVGRLPNGRP AGTSGGSINR QRSAGSVAKQ PYDPTLYAHL PSHEIPLPPS DDDGGEARSP  60
TLPLGSGSTQ DWAATQSCGG RGVETQWSYT SLLNEGLCDD DGDATVDLSF QLSSSSGAAA  120
THTRIINSHP GGDCEENTQG AVCGPRDGGL PQSVRDGGGD RNNSSLSVGG GFGARKRPDR  180
MRLSPAARSG PDATRGRQPA EDLIGGGPDV QRDGRQVWVE CRQELHRGET ETITRGVQGL  240
HVDEVEDVAV DEGQGCDDVD GEDGCKSDDL PDIRPLGRRA TRGGSGAKKG PATKPRRTKN  300
MDDDGEGGRN FWSVGDTVAL VRAKRDQDLY IAGLGISFAR MKTAAWKWED VRVRLQAMGV  360
TRDAVDCGKK WDNLMQQFKK VHKFQNLSGG KDYFRLASRD RRSEGFSFVM DRSMCDEMEA  420
MTKGDHTIHP TNLADTGAAG GVQMPAGAGG SGGTMGGDGG GETADEEQGS TKNSSFSAGS  480
GGGYGKRKNM RQQTFKAVAD VMEKHGALMG SIMDSTSKRQ CSMMSRQCEI LESEVELQRK  540
HYAAADEANR MIIKLSLRHI QYWRSVHTVT SDEIRAGRHL PFVLDAPRSH RMVAPVFALH  600
EWDFCTVVVD RARRSSSKHK DVHAEQTVLI VADNSTSFGG GRRHVPKLKR LRSEEPSPKD  660
PVRRGRYWAA SNEDEDDDVF TTEEEAADDT VAAPRGSSLQ TKNDQAAPRR LLTPPPERQQ  720
GRGQSNTKAK EIVVDVGDED NKPLESLRQR NAMQGATATG VRLRAAHEER PPQGAMPSTP  780
SQPRLCNTAA DGGSTERGGG AVAQQEARVA SAGAGAGCSG NVAVVAGARE EVPVVDREVA  840
RGENKGEKED DDPLLSRERR GGLARDLADR ARLWVDDKAF WTTGKGRRLY DIVHRMREHF  900
EAVASGVQAP VVSRSVVMPK SATTLTRIVD PAQLQQAIIR RGAAENIVLR LLHGWVFKSG  960
NRPRGYNLAF QYALESVATN LVRVMWYGEE WSNVVSVPVC AHTIDLNMDM PLWFVGMNID  1020
DRPEDDDMAT YQESTVM