PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG82991.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 803aa MW: 87889.7 Da PI: 9.5627

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG82991.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	30.9	7e-10	4	55	17	68
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikege 68 m++++ r k ++ +W +v++++++ g+ r + qC +kw+nl +++kk+ + + GBG82991.1 4 MGHAYARMKPREWKWLDVAQRLKKVGVDRDADQCGKKWDNLMQQFKKVHRFQ 55 77888999999************************************98765 PP

Sequence ? help Back to Top
Protein Sequence Length: 803 aa Download sequence
MQGMGHAYAR MKPREWKWLD VAQRLKKVGV DRDADQCGKK WDNLMQQFKK VHRFQDLSGK 60 QDFFQLSGKE RTSKGFNFNM DRAVYDEILG STAKNHTINP KNVVDIGAPG GVRLPSASFG 120 DPESVGDRDS GAGKDEDYDG STKGSSQTTG GPGSFGKRKS TRQQTFEAMM DCMDKHRSLM 180 ASTMESNSKH QCSIAIRQCE AFEAEVELQK QHYAASDEVS RLICNALMEI AKAIRERKRA 240 IKLEAGVSST MLSRGSGRGK SAANLAVGAA VQEKKGRHVS NKKRKIVAES PSLRNCVVDE 300 EWVPEEVATQ DETDFEDSND EPLKRKSTRR AAEGEDAERR GGGLPAIVED DVIDVNVATA 360 GRGGGGVMSR NNIARPAAVG RVAHTGGGAR AGGAAAGGVF YVGEGARAGG AAAGGAAHAG 420 EGAKAGDVAG AGEDDGALVI PTRQQNTREG IEVASKLWVD GLRFWNETKG IAIVRLIMEA 480 CGYLVVVARG VPPPVIRRSI VLPHTSIPQQ KLADESELNA VKERAMKVQG IALRVIHDWV 540 FKSASRPRGY HTAYQYALNH VATDIAHAMW MGEDWQICVS PMVVHFTLEM DMKLPLWFIG 600 ADVEDKHEDA DLVAYQEASI QRLVGAFTSA VSLVEAMDGG RVSYERLKTI ADAMRIMLAA 660 TMWLMRMVGD DHRAHYDAWV FVQLTTKPTL VASMHRAFDA RRHIVQAATI ITDKCGETPH 720 DIGRASTLHP RLGVHRREVL TRRHVAFPDG GKKAGLAGHR PPGGERRRQT RRQPQRRAVM 780 MPLWRPSWSS SYNGVAYYSF CRG

Sequence ? help Back to Top

Protein Sequence Length: 803 aa Download sequence

MQGMGHAYAR MKPREWKWLD VAQRLKKVGV DRDADQCGKK WDNLMQQFKK VHRFQDLSGK  60
QDFFQLSGKE RTSKGFNFNM DRAVYDEILG STAKNHTINP KNVVDIGAPG GVRLPSASFG  120
DPESVGDRDS GAGKDEDYDG STKGSSQTTG GPGSFGKRKS TRQQTFEAMM DCMDKHRSLM  180
ASTMESNSKH QCSIAIRQCE AFEAEVELQK QHYAASDEVS RLICNALMEI AKAIRERKRA  240
IKLEAGVSST MLSRGSGRGK SAANLAVGAA VQEKKGRHVS NKKRKIVAES PSLRNCVVDE  300
EWVPEEVATQ DETDFEDSND EPLKRKSTRR AAEGEDAERR GGGLPAIVED DVIDVNVATA  360
GRGGGGVMSR NNIARPAAVG RVAHTGGGAR AGGAAAGGVF YVGEGARAGG AAAGGAAHAG  420
EGAKAGDVAG AGEDDGALVI PTRQQNTREG IEVASKLWVD GLRFWNETKG IAIVRLIMEA  480
CGYLVVVARG VPPPVIRRSI VLPHTSIPQQ KLADESELNA VKERAMKVQG IALRVIHDWV  540
FKSASRPRGY HTAYQYALNH VATDIAHAMW MGEDWQICVS PMVVHFTLEM DMKLPLWFIG  600
ADVEDKHEDA DLVAYQEASI QRLVGAFTSA VSLVEAMDGG RVSYERLKTI ADAMRIMLAA  660
TMWLMRMVGD DHRAHYDAWV FVQLTTKPTL VASMHRAFDA RRHIVQAATI ITDKCGETPH  720
DIGRASTLHP RLGVHRREVL TRRHVAFPDG GKKAGLAGHR PPGGERRRQT RRQPQRRAVM  780
MPLWRPSWSS SYNGVAYYSF CRG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G35640.1	3e-07	Trihelix family protein