PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83158.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 861aa MW: 95218.1 Da PI: 6.2258

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83158.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.7	3.3e-09	304	355	19	70
trihelix 19 erlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 ++++r k k+ +We+ sk+m+ g + + C +kw+nl + ykki++ ++ GBG83158.1 304 HNYGRMKTKEWKWEDMSKRMANAGRPKDADDCMKKWDNLFQNYKKIQRFQNA 355 56778899**************************************987665 PP

Sequence ? help Back to Top
Protein Sequence Length: 861 aa Download sequence
MYTYLESWDT PLPPSDEEPE KEELSTLPLA SGSTQLWSQT VRVGGSAPDE GGEFTSLLHQ 60 GLRDDDGGGV DLRFELCSGG GRGVSRTFII DGDHSARGVE HGGSLHTKQS TLCRAAPVTG 120 AVGPSPAGWH HGSTAPSVDR LTPTWPAPLG VAAGPLRMGG AHSMMPACTT PVESGMRDEG 180 TCREPVRPRP TVENITRGLS NMRTHSDGDE DDVGFGDDAD EGMREDVEAG DDDDDVPIRP 240 LGKTAGRGKG RGKGGVRGRS VGRGGRGGVS DDAGKSPTYW SAEDQMLRVR CKREQDMHLP 300 GLSHNYGRMK TKEWKWEDMS KRMANAGRPK DADDCMKKWD NLFQNYKKIQ RFQNASRRPD 360 FFRLTNEERK EHNFKFRMDR ALYNEIHAGT SGWGAAAQAR SGWRESVCCE AAGEGCPDER 420 SSARESGSNV GSVAGGGKRK NARQQAFESI SDVMERHGAL MSSTIESSSK RQCSIFTRQC 480 DILEQEVAVQ KAHYAASDET QRIMCQALLE IVAAIRGRSA IRALHRDRLW GSPASMSVRL 540 NARGKKCDVA LDETQAQGKG RRHVPKAKRL RLDDASVSVQ HRGAQGWSQP AEEDNDDDFM 600 TEDDQCEAMA SAGRESARQH TTDQSASKRM STLLPEVQQL RVRETWKEKG VVVDLGGEDD 660 EPLERRRLRN IARAMWYGEE WRNVVGAPIC AHTIDLNMDL PLWYADVNIE DRPEDDDMAA 720 YQESTVISIA HSFCSAVQMG AHIDDDFISY ERLCRVADCF RLLLAASMWI MRMAGDDPRS 780 HYEAFYFADL VARPTLITSM HRSFDHRRSV TRAANVVTER LGKAKVTLGV YPDYIPDWAP 840 CGIGFAHDAT IKVPEDAKRL D

Sequence ? help Back to Top

Protein Sequence Length: 861 aa Download sequence

MYTYLESWDT PLPPSDEEPE KEELSTLPLA SGSTQLWSQT VRVGGSAPDE GGEFTSLLHQ  60
GLRDDDGGGV DLRFELCSGG GRGVSRTFII DGDHSARGVE HGGSLHTKQS TLCRAAPVTG  120
AVGPSPAGWH HGSTAPSVDR LTPTWPAPLG VAAGPLRMGG AHSMMPACTT PVESGMRDEG  180
TCREPVRPRP TVENITRGLS NMRTHSDGDE DDVGFGDDAD EGMREDVEAG DDDDDVPIRP  240
LGKTAGRGKG RGKGGVRGRS VGRGGRGGVS DDAGKSPTYW SAEDQMLRVR CKREQDMHLP  300
GLSHNYGRMK TKEWKWEDMS KRMANAGRPK DADDCMKKWD NLFQNYKKIQ RFQNASRRPD  360
FFRLTNEERK EHNFKFRMDR ALYNEIHAGT SGWGAAAQAR SGWRESVCCE AAGEGCPDER  420
SSARESGSNV GSVAGGGKRK NARQQAFESI SDVMERHGAL MSSTIESSSK RQCSIFTRQC  480
DILEQEVAVQ KAHYAASDET QRIMCQALLE IVAAIRGRSA IRALHRDRLW GSPASMSVRL  540
NARGKKCDVA LDETQAQGKG RRHVPKAKRL RLDDASVSVQ HRGAQGWSQP AEEDNDDDFM  600
TEDDQCEAMA SAGRESARQH TTDQSASKRM STLLPEVQQL RVRETWKEKG VVVDLGGEDD  660
EPLERRRLRN IARAMWYGEE WRNVVGAPIC AHTIDLNMDL PLWYADVNIE DRPEDDDMAA  720
YQESTVISIA HSFCSAVQMG AHIDDDFISY ERLCRVADCF RLLLAASMWI MRMAGDDPRS  780
HYEAFYFADL VARPTLITSM HRSFDHRRSV TRAANVVTER LGKAKVTLGV YPDYIPDWAP  840
CGIGFAHDAT IKVPEDAKRL D