PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83176.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 444aa    MW: 48061.9 Da    PI: 7.8903
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83176.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix28.73.5e-091892382069
    trihelix  20 rlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegek 69 
                 +++r+  k++ W+ v   m+e+g++r  +qCk+k++++  +y+k+k +e+
  GBG83176.1 189 AYGRAGVKGNFWKFVELCMKEKGYNRDHEQCKNKFNQVIEYYRKLKCHER 238
                 56777889999**********************************98887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 444 aa     Download sequence    
MAEGHSSTPH CAQHLSFHSD VAPRDNCRVG SSGLSPITSA DHVANASPTQ RGGAATTPPV  60
SDVAGGAGGS SSSPAGHGSP YSPSVASQHH VPSEYLINRL IRDIEDGISP AHNAADTAAA  120
DNVGGNAAAP SRTPPHQSGD LTPVNRTPTR AGGRGQSSQS PSGVVREART SPAARPQGQQ  180
VLMIEGTEAY GRAGVKGNFW KFVELCMKEK GYNRDHEQCK NKFNQVIEYY RKLKCHERWS  240
GLPSYRDMNS TRRKKYKVDF VLRRSWYDII HSVEKDMDSI NLTYLRDGGD DPLQHKDIDD  300
MGDADGETEG PSEDPGGGSR VASGGSRSTT FEPTLEKRKR VFSNAREASV QAVTSAMRDH  360
TTALTRSNRE CAKMQCDTTR DVAKQQAELA TQLMQQDLAG RERVATIVGD RVESGYNRLA  420
DAILMMGSRR RSHSSNDPRS SESE