PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83206.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family bHLH
Protein Properties Length: 339aa    MW: 35949.9 Da    PI: 4.9076
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83206.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH35.41.9e-11186231654
                 HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                   rE+ RRdr+N++f+eL  +l +    + +K +Ka+iL  A++ +++L
  GBG83206.1 186 ANREKMRRDRLNERFNELSAILEPG---RLPKTDKASILVDAIRVVSQL 231
                 569*********************8...89****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    
MAGAANGSEE QLLLLGLAAS AEDGGRSTQE KWLPSMPAMP AMAAFLGEED HMGGHLGQGR  60
SGGETGSRSP NPPWLSAFFN DNVVSDDIAE AQSCGQFFWV SNAPLAEEAE CSGVGGGGGG  120
ESGGEGGAEG GAEGGGEGGG EGGNKRENEG QESKRDVTVT GRKREREELG STATATPTAT  180
ASCSKANREK MRRDRLNERF NELSAILEPG RLPKTDKASI LVDAIRVVSQ LRHEAIHLKE  240
ENQQLCESIK ELKAEKNELR GEKARLKMEK ERLEAQTKSM VPASYLNHQA TSTPSLAIPH  300
SQKVMTPAAA PFTPGFMWQW LPPSSLDTSQ DGVLRPPVA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.16e-49bHLH family protein