PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GBG83483.1
Organism
Chara braunii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara
Family Trihelix
Protein Properties Length: 234aa    MW: 26413.7 Da    PI: 7.8435
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GBG83483.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix34.45.9e-11109192282
    trihelix   2 WtkqevlaLiearr.......emeerlrrgklkkplWeevskkmrergf.erspkqCkekwenlnkrykkikegekkrtsessstcpyf 82 
                 Wt ++  aL+ a+r        +++++++ k++  +W++v k++++ g+ +r++++C +kwen+ +++k ++ g++++ ++++     f
  GBG83483.1 109 WTVDHMIALVWAKRdqdlhlaGLGHNYGQMKSRTWKWDDVEKRLMKVGVtTRKAEECGKKWENMYQQFKSVRGGKRRNVKQQT-----F 192
                 999999999999995555555555666678999***************9889**********************999755443.....4 PP
Sequence ? help Back to Top
Protein Sequence    Length: 234 aa     Download sequence    
MGRQVWDDHQ RQSRPSSPFG ITRGVAKMNV RGHDMVVDCD GGGGEDCTTV VGDNDNGEND  60
DGDMEIRPLG RKRGGTRATD KSMEPCAGRK SKQAVDDMST GDGGSRDFWT VDHMIALVWA  120
KRDQDLHLAG LGHNYGQMKS RTWKWDDVEK RLMKVGVTTR KAEECGKKWE NMYQQFKSVR  180
GGKRRNVKQQ TFDEIADAMD KHTKLMAMTV DSAIKRECSV LTRQCDILER EVEV