PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83626.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 990aa MW: 108718 Da PI: 6.1482

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83626.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	28.3	4.5e-09	356	431	2	70
trihelix 2 WtkqevlaLiearremeerlr.......rgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekk 70 W+ +e +aL++ + e e +l r + k+ +W+ ++k+m+ g + + C +kw+nl + ykki++ e+ GBG83626.1 356 WSPEEQMALVRCKWEQEMHLAglghnygRMRTKEWKWDNIAKRMAIAGRPKDADDCMKKWDNLFQNYKKIQRFENA 431 9999999999999865555553333222778***************************************998875 PP

Sequence ? help Back to Top
Protein Sequence Length: 990 aa Download sequence
MAAMHRRLPL LVLAVVVFLF VVFLHVCLSC RPWKQRHKWR ASSKRQVGER LMAGMQARAD 60 VAAGHSGRRP ATAVQARQYD PSMYAHLESW ETPLPPSDEE LEAEELPTLP LASGSTQRLS 120 QTVRAGGATS NEGSEYTSLL RQGLGDDDDN GGLDLKFGLC SSSAREVSHT SVSYTHLDVY 180 KRQHLESWET PLPPSDEELE AEELPTLPLA SGSTQRLSQT VRAGGATSNE GSEYTSLLRQ 240 GLGDDDDNGG LDLKFGLCSS SAREVSHTFI IDADPSPRGL QHAGSEHTEQ STLRGDEGFR 300 EDVEAVDDDD DIPIRPLGKT GGRGKGRGRG AVRGRSVGRG GRGGVNDDGG KSATYWSPEE 360 QMALVRCKWE QEMHLAGLGH NYGRMRTKEW KWDNIAKRMA IAGRPKDADD CMKKWDNLFQ 420 NYKKIQRFEN ASGHEDFFRL SNEERKGHNF KFRMDRVVYN EIHAGMLGNH TIFPPNVADT 480 GSPDGVQLPR RGAVGGEYVG SEAGGDGCPE ERSSARDSDN NAGTGAGGGK RKNVRLQALE 540 SIADVMDRHG ELMSATIDSS SKRQCSIFTR QRDTLEEEVA VKKAHYVASE ETQRMMCHTL 600 MEIAAAIRDR SPIAIRVMTE GLSSVAAGGK SWQKLAVGGE AGGGAGAGAL DTVAPVAAAR 660 EEAAVIATTR EEACGENKSD WDGDDPGSSR VRRGVMTKDL VDRVVLWVDD KAFWTMGEGR 720 RLYNIVHKTR EYFVATASGL PAPVVPRSVV LPKSSTKSSN RPMGYNVAFQ YSLESVATDI 780 ARAMWCGEEW CNVVSATVCA HTIDLSMDLP LWFADTNIED RPEDDDMAAY QESTIICVSH 840 AFRAAVQMGA HIDDDFISYD RLYRVTDCFR LLLAACMRIM RMAGNDPRNH YEAFYFADLV 900 AKPTLVMSMH RSFDHRRSIV RAAKVVTHRL GKTKATFGAY PNYIPGWAPC GIGFRHDASI 960 TGPEDAKKLD WLGLGPPDDD NNNDDGKYDA

Sequence ? help Back to Top

Protein Sequence Length: 990 aa Download sequence

MAAMHRRLPL LVLAVVVFLF VVFLHVCLSC RPWKQRHKWR ASSKRQVGER LMAGMQARAD  60
VAAGHSGRRP ATAVQARQYD PSMYAHLESW ETPLPPSDEE LEAEELPTLP LASGSTQRLS  120
QTVRAGGATS NEGSEYTSLL RQGLGDDDDN GGLDLKFGLC SSSAREVSHT SVSYTHLDVY  180
KRQHLESWET PLPPSDEELE AEELPTLPLA SGSTQRLSQT VRAGGATSNE GSEYTSLLRQ  240
GLGDDDDNGG LDLKFGLCSS SAREVSHTFI IDADPSPRGL QHAGSEHTEQ STLRGDEGFR  300
EDVEAVDDDD DIPIRPLGKT GGRGKGRGRG AVRGRSVGRG GRGGVNDDGG KSATYWSPEE  360
QMALVRCKWE QEMHLAGLGH NYGRMRTKEW KWDNIAKRMA IAGRPKDADD CMKKWDNLFQ  420
NYKKIQRFEN ASGHEDFFRL SNEERKGHNF KFRMDRVVYN EIHAGMLGNH TIFPPNVADT  480
GSPDGVQLPR RGAVGGEYVG SEAGGDGCPE ERSSARDSDN NAGTGAGGGK RKNVRLQALE  540
SIADVMDRHG ELMSATIDSS SKRQCSIFTR QRDTLEEEVA VKKAHYVASE ETQRMMCHTL  600
MEIAAAIRDR SPIAIRVMTE GLSSVAAGGK SWQKLAVGGE AGGGAGAGAL DTVAPVAAAR  660
EEAAVIATTR EEACGENKSD WDGDDPGSSR VRRGVMTKDL VDRVVLWVDD KAFWTMGEGR  720
RLYNIVHKTR EYFVATASGL PAPVVPRSVV LPKSSTKSSN RPMGYNVAFQ YSLESVATDI  780
ARAMWCGEEW CNVVSATVCA HTIDLSMDLP LWFADTNIED RPEDDDMAAY QESTIICVSH  840
AFRAAVQMGA HIDDDFISYD RLYRVTDCFR LLLAACMRIM RMAGNDPRNH YEAFYFADLV  900
AKPTLVMSMH RSFDHRRSIV RAAKVVTHRL GKTKATFGAY PNYIPGWAPC GIGFRHDASI  960
TGPEDAKKLD WLGLGPPDDD NNNDDGKYDA