PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GBG83821.1

Organism

Chara braunii

Taxonomic ID

69332

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Charophyceae; Charales; Characeae; Chara

Family

Trihelix

Protein Properties

Length: 562aa MW: 61502.7 Da PI: 6.2939

Description

Trihelix family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GBG83821.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	trihelix	27.3	9.4e-09	327	377	17	67
trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikeg 67 m+++++r+k ++ +We+ +++++ ++r+++ C +kw+nl +++kk+ + GBG83821.1 327 MGHNFGRTKTREWKWEDMRARLQKMSVTRKAIDCGKKWDNLMQQFKKVHKF 377 7899*******************************************9875 PP

Sequence ? help Back to Top
Protein Sequence Length: 562 aa Download sequence
MADLLYRLPL LLLFVVLLLI VVFFHMCSVG LVPVVARKRR SSKNGDRMDH RVTCGRPAGT 60 TPGASNQQRS AGSVAKQAYD PTLYAHLPSH EIPLPSSDDK GEDARSSTLP LGSGSTQDSA 120 ASQSHGGRQA DTPWSYTSLL NERMCDDDDN AAVDLSFHLS SSSVAAAMHT RIINPHPNED 180 CTKQTYVGPC GPRYDGLPPS LHDGGGNRNV SSTQGRGGVG TDQRPEWMCL SPASRSGSGT 240 PRGRQRQEDL PEGGAHVECD DRQLWAECRQ ALRQAGIETI TREVQRLHVG DDDDAAFQEP 300 LDCDDVDCDE DCNSDDFPNI YLYIAGMGHN FGRTKTREWK WEDMRARLQK MSVTRKAIDC 360 GKKWDNLMQQ FKKVHKFQHL SGGKDYFKLA SSAKRSEGFN FVMDGTVYDE MEAMTKGDHT 420 IHPKNLADTG AAGGAQMPAG AGAGGESMAS EGGGEAADED QGSTKDSKFS AGSADGSGKR 480 KNMWQQTFEA IAEVMDKHGA LMASTIHSAS KRRCSMMLRQ CEILETEVEV QRKHYATADE 540 ANRMMTLCNA LMEIVKVIRE RS

Sequence ? help Back to Top

Protein Sequence Length: 562 aa Download sequence

MADLLYRLPL LLLFVVLLLI VVFFHMCSVG LVPVVARKRR SSKNGDRMDH RVTCGRPAGT  60
TPGASNQQRS AGSVAKQAYD PTLYAHLPSH EIPLPSSDDK GEDARSSTLP LGSGSTQDSA  120
ASQSHGGRQA DTPWSYTSLL NERMCDDDDN AAVDLSFHLS SSSVAAAMHT RIINPHPNED  180
CTKQTYVGPC GPRYDGLPPS LHDGGGNRNV SSTQGRGGVG TDQRPEWMCL SPASRSGSGT  240
PRGRQRQEDL PEGGAHVECD DRQLWAECRQ ALRQAGIETI TREVQRLHVG DDDDAAFQEP  300
LDCDDVDCDE DCNSDDFPNI YLYIAGMGHN FGRTKTREWK WEDMRARLQK MSVTRKAIDC  360
GKKWDNLMQQ FKKVHKFQHL SGGKDYFKLA SSAKRSEGFN FVMDGTVYDE MEAMTKGDHT  420
IHPKNLADTG AAGGAQMPAG AGAGGESMAS EGGGEAADED QGSTKDSKFS AGSADGSGKR  480
KNMWQQTFEA IAEVMDKHGA LMASTIHSAS KRRCSMMLRQ CEILETEVEV QRKHYATADE  540
ANRMMTLCNA LMEIVKVIRE RS